MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-194-P4

Family name MIR-194 (all species)
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-194-2
Paralogues Aca-Mir-194-P2 
Orthologues Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Mun-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343545.1: 154421-154479 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-2188 GL343545.1: 105074-105134 [-] UCSC Ensembl
Mir-194-P4 GL343545.1: 154421-154479 [-] UCSC Ensembl
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
AUGCCACCGAUGUGUAUGGUUCCCAUCGGCUGUAACAGCAACUCCAUGUGGAAGCAGUCCGGCCGUUCCAGUGGAGCGGCUGUUAUAGUCGGUGGGGGCUGCAAAAGACCCCGGGAGAU
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Structure
        10          20        30        40        50         
AUGCCACCGAUGUGUAU--|                     AA      G     GCAGU 
                   GGUUCCCAUCGGCUGUAACAGC  CUCCAU UGGAA     C
                   UCGGGGGUGGCUGAUAUUGUCG  GAGGUG ACCUU     C
UAGAGGGCCCCAGAAAACG^                     GC      -     GCCGG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-194-P4_5p
mirBase accessionMIMAT0021828
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
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Star sequence

Aca-Mir-194-P4_3p*
mirBase accessionMIMAT0021830
Sequence 
37- CCAGUGGAGCGGCUGUUAUAGU -59
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