MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-194-P4

Family name MIR-194 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-194-P2 
Orthologues Aca-Mir-194-P4  Ami-Mir-194-P4  Bta-Mir-194-P4  Cfa-Mir-194-P4  Cja-Mir-194-P4  Cpi-Mir-194-P4  Cpo-Mir-194-P4  Dno-Mir-194-P4  Dre-Mir-194-P4a  Dre-Mir-194-P4b  Eca-Mir-194-P4  Ete-Mir-194-P4  Gja-Mir-194-P4  Gmo-Mir-194-P4a  Gmo-Mir-194-P4b  Hsa-Mir-194-P4  Lch-Mir-194-P4  Loc-Mir-194-P4  Mal-Mir-194-P4a  Mal-Mir-194-P4b  Mml-Mir-194-P4  Mmr-Mir-194-P4  Mmu-Mir-194-P4  Neu-Mir-194-P4  Oan-Mir-194-P4  Ocu-Mir-194-P4  Pab-Mir-194-P4  Pbv-Mir-194-P4  Rno-Mir-194-P4  Sha-Mir-194-P4  Spt-Mir-194-P4  Sto-Mir-194-P4  Tni-Mir-194-P4a  Tni-Mir-194-P4b  Xla-Mir-194-P4c  Xla-Mir-194-P4d  Xtr-Mir-194-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_901765095.2_aMicUni1.2)		 LR594642.1: 122927591-122927647 [-]
Clustered miRNAs
(< 50kb from Mir-194-P4)		 Mir-192-P4 LR594642.1: 122925886-122925948 [-]
Mir-194-P4 LR594642.1: 122927591-122927647 [-]
Seed GUAACAG
Precursor
(pre-Mir +30nt flank)		 
UAUCCACUACUUAUCUCAGUGUCUAUUGCAUGUAACAGCAACUCCAUGUGGAAGGGUCUGUGUUUCCAGUGGAGCUGCUGUUAUUAUCCAUGGGCACCUAUGGACGACCCGAGAGAA
Get precursor sequence
Structure
        10          20        30        40        50        
UAUCCACUACUUAUCUCA--|       UGCAU         A      G     GGGU 
                    GUGUCUAU     GUAACAGCA CUCCAU UGGAA    C
                    CACGGGUA     UAUUGUCGU GAGGUG ACCUU    U
AAGAGAGCCCAGCAGGUAUC^       CCUAU         C      -     UGUG 
     110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Mun-Mir-194-P4_5p
mirBase accessionNone
Sequence 
0- UGUAACAGCAACUCCAUGUGGAA -23
Get sequence
Star sequence

Mun-Mir-194-P4_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGAGCUGCUGUUAUUAU -57
Get sequence