MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-192-P4

Family name MIR-192 (all species)
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015165831.1: 1121834-1121897 [-]
Clustered miRNAs
(< 50kb from Mir-192-P4)		 Mir-192-P4 NW_015165831.1: 1121834-1121897 [-]
Mir-194-P4 NW_015165831.1: 1123408-1123465 [-]
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)		 
CCUUCGGCUUCGGAUCGAGGGCACACAGCUAUGACCUAUGAAUUGACAGCCAGUCCUCCUACUCCUUCCUGGCUGUCAGUUCUGUAGGGCACAAGUUUGUCCCCCUCCAUGGCCACCACCCACG
Get precursor sequence
Structure
        10          20        30          40        50        60 
CCUUCGGCUUCGGAUCGA--   C   C    A-  A     -|           AGUCCUCCU 
                    GGG ACA AGCU  UG CCUAU GAAUUGACAGCC         \
                    CCC UGU UUGA  AC GGAUG CUUGACUGUCGG         A
GCACCCACCACCGGUACCUC   C   -    AC  G     U^           UCCUUCCUC 
  120       110       100         90        80        70
Deep sequencing
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CommentThere are Dicer cuts +1 and +2 on both arms, and a Dicer cut +3 on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Gja-Mir-192-P4_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGCC -21
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Star sequence

Gja-Mir-192-P4_3p*
mirBase accessionNone
Sequence 
42- CUGUCAGUUCUGUAGGGCACAA -64
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