MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-192-P4

Family name MIR-192 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-192
Paralogues Bta-Mir-192-P2 
Orthologues Ami-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Dre-Mir-192-P4b  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Gmo-Mir-192-P4b  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mal-Mir-192-P4b  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Tni-Mir-192-P4b-v1  Xla-Mir-192-P4c  Xla-Mir-192-P4d  Xtr-Mir-192-P4 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037356.1: 43114370-43114434 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4)
Mir-192-P4 NC_037356.1: 43114370-43114434 [-] UCSC Ensembl
Mir-194-P4 NC_037356.1: 43114583-43114639 [-] UCSC Ensembl
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)
GCAGGCUGCCAAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUCUUGUGUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGCCACCAGGA
Get precursor sequence
Structure
        10          20        30          40        50        60 
GCAGGCUGCCAAGACCGA--   C   GG   C-        -|     A     AGUGCUCUU 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         G
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         U
AGGACCACCGACCGUAACUC   U   A-   AC        C^     C     UCUCCCCUG 
   120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-192-P4_5p

mirBase accessionMIMAT0003820
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
Get sequence
Proposed targets TargetScanVert: bta-miR-192
Star sequence

Bta-Mir-192-P4_3p*

mirBase accessionNone
Sequence
43- CUGCCAAUUCCAUAGGUCACAG -65
Get sequence