MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-192-P4c

Family name MIR-192 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-192
Paralogues Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xla-Mir-192-P4d 
Orthologues Ami-Mir-192-P4  Bta-Mir-192-P4  Cfa-Mir-192-P4  Cja-Mir-192-P4  Cpi-Mir-192-P4  Cpo-Mir-192-P4  Dno-Mir-192-P4  Eca-Mir-192-P4  Ete-Mir-192-P4  Gja-Mir-192-P4  Hsa-Mir-192-P4  Loc-Mir-192-P4  Mml-Mir-192-P4  Mmr-Mir-192-P4  Mmu-Mir-192-P4  Mun-Mir-192-P4  Neu-Mir-192-P4  Oan-Mir-192-P4  Ocu-Mir-192-P4  Pab-Mir-192-P4  Rno-Mir-192-P4  Sha-Mir-192-P4  Spt-Mir-192-P4  Xtr-Mir-192-P4 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030730.1: 23107083-23107143 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P4c)		 Mir-194-P4c NC_030730.1: 23104037-23104095 [+] UCSC Ensembl
Mir-192-P4c NC_030730.1: 23107083-23107143 [+] UCSC Ensembl
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)		 
AAUAGAGAGAGGAAGAGAGUGUACGGGCCUAUGACCUAUGAAUUGACAGCCAGUGGAUGUACAGUCUGCCUGUCAAUUCUGUAGGCCACAGGUUCGUCCACCUUGUUGCUAUACACAAAAA
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Structure
        10          20        30         40        50         
AAUAGAGAGAGGAAGAGA--   U        A  A     -|         C  GUGGAU 
                    GUG ACGGGCCU UG CCUAU GAAUUGACAG CA      G
                    CAC UGCUUGGA AC GGAUG CUUAACUGUC GU      U
AAAAACACAUAUCGUUGUUC   C        C  C     U^         C  CUGACA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Em
Mature sequence

Xla-Mir-192-P4c_5p
mirBase accessionMIMAT0046504
Sequence 
0- AUGACCUAUGAAUUGACAGCCA -22
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Star sequence

Xla-Mir-192-P4c_3p*
mirBase accessionMIMAT0046505
Sequence 
38- CCUGUCAAUUCUGUAGGCCACAG -61
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