| MirGeneDB ID | Spt-Mir-192-P4 |
|---|---|
| Family name | MIR-192 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-192-P2 |
| Orthologues | Ami-Mir-192-P4 Bta-Mir-192-P4 Cfa-Mir-192-P4 Cja-Mir-192-P4 Cpi-Mir-192-P4 Cpo-Mir-192-P4 Dno-Mir-192-P4 Dre-Mir-192-P4b Eca-Mir-192-P4 Ete-Mir-192-P4 Gja-Mir-192-P4 Gmo-Mir-192-P4b Hsa-Mir-192-P4 Loc-Mir-192-P4 Mal-Mir-192-P4b Mml-Mir-192-P4 Mmr-Mir-192-P4 Mmu-Mir-192-P4 Mun-Mir-192-P4 Neu-Mir-192-P4 Oan-Mir-192-P4 Ocu-Mir-192-P4 Pab-Mir-192-P4 Rno-Mir-192-P4 Sha-Mir-192-P4 Tni-Mir-192-P4b-v1 Xla-Mir-192-P4c Xla-Mir-192-P4d Xtr-Mir-192-P4 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01015260.1: 385969-386032 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-192-P4) |
Mir-194-P4
QEPC01015260.1: 384821-384880 [+]
UCSC
Ensembl
Mir-192-P4 QEPC01015260.1: 385969-386032 [+] UCSC Ensembl |
| Seed | UGACCUA |
| Precursor (pre-Mir +30nt flank) |
AGCCGCUCCGAGGACUGAGUGCACAGGGCUAUGACCUAUGAACUGACAGCCAGUCCUCCGGCCGUGCCUUGGCUGUCAGUUCUAUAGGGCACAGGUAUGUUCGCCUCCAUGACGACCGACGGACGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGCCGCUCCGAGGACUGA-- C GG A- A -| AGUCCUCCG GUG ACA GCU UG CCUAU GAACUGACAGCC \ CGC UGU UGG AC GGAUA CUUGACUGUCGG G CAGGCAGCCAGCAGUACCUC U A- AC G U^ UUCCGUGCC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Spt-Mir-192-P4_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AUGACCUAUGAACUGACAGCC -21
Get sequence
|
| Star sequence | Spt-Mir-192-P4_3p* (predicted) |
| mirBase accession | None |
| Sequence |
42- CUGUCAGUUCUAUAGGGCACAG -64
Get sequence
|
