MirGeneDB 2.1
MirGeneDB ID

Gja-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-192-P1 
Orthologues Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Dre-Mir-192-P2b  Ete-Mir-192-P2  Gmo-Mir-192-P2b  Hsa-Mir-192-P2  Loc-Mir-192-P2  Mal-Mir-192-P2b  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Ocu-Mir-192-P2  Rno-Mir-192-P2  Sha-Mir-192-P2  Spt-Mir-192-P2  Tni-Mir-192-P2b-v1  Tni-Mir-192-P2b-v2  Xla-Mir-192-P2c  Xla-Mir-192-P2d  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015165831.1: 1121834-1121897 [-]
Precursor
(pre-Mir +30nt flank)
CCUUCGGCUUCGGAUCGAGGGCACACAGCUAUGACCUAUGAAUUGACAGCCAGUCCUCCUACUCCUUCCUGGCUGUCAGUUCUGUAGGGCACAAGUUUGUCCCCCUCCAUGGCCACCACCCACG
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Structure
        10          20        30          40        50        60 
CCUUCGGCUUCGGAUCGA--   C   C    A-  A     -|           AGUCCUCCU 
                    GGG ACA AGCU  UG CCUAU GAAUUGACAGCC         \
                    CCC UGU UUGA  AC GGAUG CUUGACUGUCGG         A
GCACCCACCACCGGUACCUC   C   -    AC  G     U^           UCCUUCCUC 
  120       110       100         90        80        70
Deep sequencing
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CommentThere are Dicer cuts +1 and +2 on both arms, and a Dicer cut +3 on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-192-P2_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGCC -21
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Star sequence

Gja-Mir-192-P2_3p*
mirBase accessionNone
Sequence 
42- CUGUCAGUUCUGUAGGGCACAA -64
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