MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-192-P2

Family name MIR-192 (all species)
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-215
Paralogues
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(colLiv2)		 scaffold54: 1524407-1524465 [-]
Clustered miRNAs
(< 50kb from Mir-192-P2)		 Mir-192-P2 scaffold54: 1524407-1524465 [-]
Mir-194-P2 scaffold54: 1524720-1524775 [-]
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)		 
UAGGCUUAAUAAGAACUGGUGUCCAGGAAAAUGACCUAUGAAUUGACAGACUGCUUUCUAAACUUGCCUGUCAUUUCUAUAGGCCAAUAUUCUGCACACUUUCACUACUCUAGUUACAG
Get precursor sequence
Structure
        10          20        30         40        50        
UAGGCUUAAUAAGAACU--     C     AAA  A     -|  U      ACUGCUUU 
                   GGUGU CAGGA   UG CCUAU GAA UGACAG        C
                   UCACA GUCUU   AC GGAUA CUU ACUGUC        U
GACAUUGAUCUCAUCACUU     C     AUA  C     U^  U      CGUUCAAA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Li Mi Ov Pe Te To
Mature sequence

Cli-Mir-192-P2_5p
mirBase accessionMIMAT0038594
Sequence 
0- AUGACCUAUGAAUUGACAGACU -22
Get sequence
Star sequence

Cli-Mir-192-P2_3p*
mirBase accessionMIMAT0038595
Sequence 
36- CCUGUCAUUUCUAUAGGCCAAUA -59
Get sequence