Mir-192-P2

MirGeneDB ID

Oan-Mir-192-P2

Family name

MIR-192 (all species)

Seed

UGACCUA

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

oan-mir-192

Paralogues

Oan-Mir-192-P1 Oan-Mir-192-P1-as

Orthologues

Ami-Mir-192-P2 Bta-Mir-192-P2 Cfa-Mir-192-P2 Cpi-Mir-192-P2 Cpo-Mir-192-P2 Dno-Mir-192-P2 Dre-Mir-192-P2b Ete-Mir-192-P2 Gja-Mir-192-P2 Gmo-Mir-192-P2b Hsa-Mir-192-P2 Loc-Mir-192-P2 Mal-Mir-192-P2b Mml-Mir-192-P2 Mmu-Mir-192-P2 Mun-Mir-192-P2 Ocu-Mir-192-P2 Rno-Mir-192-P2 Sha-Mir-192-P2 Spt-Mir-192-P2 Tni-Mir-192-P2b-v1 Tni-Mir-192-P2b-v2 Xla-Mir-192-P2c Xla-Mir-192-P2d Xtr-Mir-192-P2

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(mOrnAna1.p.v1_plustraces)

NC_041730.1: 7220148-7220211 [+]

Clustered miRNAs
(< 50kb from Mir-192-P2)

Mir-194-P2 NC_041730.1: 7219904-7219961 [+]
Mir-192-P2 NC_041730.1: 7220148-7220211 [+]

Precursor
(pre-Mir +30nt flank)

GCCCCUCGGAGAGAGAGAGCGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUUCUCUCUGACCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAAGCCAGCAGCGAGGA

Get precursor sequence

Structure

        10          20        30          40        50        60 
GCCCCUCGGAGAGAGAGA--   C   GG   C-        -|     A     AGUUCUCUC 
                    GCG ACA  GCU  UGACCUAU GAAUUG CAGCC         \
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         U
AGGAGCGACGACCGAAACUC   U   A-   AC        C^     C     UCUCCCCAG 
  120       110       100         90        80        70