MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-192-P2

Family name MIR-192 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(echTel2)
JH980299: 49541581-49541640 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-192-P2)
Mir-192-P2 JH980299: 49541581-49541640 [-] UCSC
Mir-194-P2 JH980299: 49541869-49541925 [-] UCSC
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)
GCGCAUCAUCAAGAAACAGCGCACAGGAAAAUGACCUAUGAAUUGACAGACAAUAUGGCCAAGCUUGUCUGUCAUUUCUGUAGGCCAAUAUUCUGUAUGUCUCUGCUACUUCAAAAUCAG
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Structure
        10          20        30         40        50         
GCGCAUCAUCAAGAAACA--   C      AAA  A     -|  U         AUAUGG 
                    GCG ACAGGA   UG CCUAU GAA UGACAGACA      \
                    UGU UGUCUU   AC GGAUG CUU ACUGUCUGU      C
GACUAAAACUUCAUCGUCUC   A      AUA  C     U^  U         UCGAAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ete-Mir-192-P2_5p

mirBase accessionNone
Sequence
0- AUGACCUAUGAAUUGACAGACA -22
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Star sequence

Ete-Mir-192-P2_3p*

mirBase accessionNone
Sequence
37- UCUGUCAUUUCUGUAGGCCAAUA -60
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