MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-192-P2

Family name MIR-192 (all species)
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-215
Paralogues Xtr-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(xenTro9_add)		 chr5: 6916171-6916232 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P2)		 Mir-194-P2 chr5: 6915468-6915523 [+] UCSC Ensembl
Mir-192-P2 chr5: 6916171-6916232 [+] UCSC Ensembl
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)		 
AGGCCAAUGAUCUAACUGGUAACCAGGAGGAUGACCUAUGAAAUGACAGCCACUUCCAUACCAAACAUGUCUGUCAUUUCUGUAGGCCAAUAUUCUGAUUGCUUUGUUGACGGCAGAGAAAC
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Structure
        10          20        30         40        50          
AGGCCAAUGAUCUAACU--     C     GGA  A     -|         C  CUUCCAU 
                   GGUAA CAGGA   UG CCUAU GAAAUGACAG CA       \
                   UCGUU GUCUU   AC GGAUG CUUUACUGUC GU       A
CAAAGAGACGGCAGUUGUU     A     AUA  C     U^         U  ACAAACC 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-192-P2_5p
mirBase accessionMIMAT0003628
Sequence 
0- AUGACCUAUGAAAUGACAGCCA -22
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Proposed targets TargetScanVert: xtr-miR-215
Star sequence

Xtr-Mir-192-P2_3p*
mirBase accessionNone
Sequence 
39- UCUGUCAUUUCUGUAGGCCAAUA -62
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