MirGeneDB 2.1

MirGeneDB ID

Cpo-Mir-192-P2

Family name MIR-192 (all species)
Seed UGACCUA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-192
Paralogues Cpo-Mir-192-P1 
Orthologues Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cpi-Mir-192-P2  Dno-Mir-192-P2  Dre-Mir-192-P2b  Ete-Mir-192-P2  Gja-Mir-192-P2  Gmo-Mir-192-P2b  Hsa-Mir-192-P2  Loc-Mir-192-P2  Mal-Mir-192-P2b  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Ocu-Mir-192-P2  Rno-Mir-192-P2  Sha-Mir-192-P2  Spt-Mir-192-P2  Tni-Mir-192-P2b-v1  Tni-Mir-192-P2b-v2  Xla-Mir-192-P2c  Xla-Mir-192-P2d  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)
scaffold_42: 5717225-5717289 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-192-P2)
Mir-192-P2 scaffold_42: 5717225-5717289 [-] UCSC
Mir-194-P2 scaffold_42: 5717423-5717480 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UGGGCUGCCCAAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUGUCAGCUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCUGCCGCCGCUG
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Structure
        10          20        30          40        50        60 
UGGGCUGCCCAAGACCGA--   C   GG   C-        -|     A     AGUGCUGUC 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         A
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         G
GUCGCCGCCGUCCGUAACUC   U   A-   AC        C^     C     UCUCCCCUC 
   120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Cpo-Mir-192-P2_5p

mirBase accessionMIMAT0047068
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
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Star sequence

Cpo-Mir-192-P2_3p*

mirBase accessionMIMAT0047069
Sequence
43- CUGCCAAUUCCAUAGGUCACAG -65
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