MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-192-P2

Family name MIR-192 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-192-P4 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Laf-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021933.1: 4783618-4783677 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P2)		 Mir-192-P2 CM021933.1: 4783618-4783677 [-] UCSC Ensembl
Mir-194-P2 CM021933.1: 4784038-4784095 [-] UCSC Ensembl
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)		 
AGUCAUCAUUCAGAAAUGGUAUACAGGAAAAUGACCUAUGAAUUGACAGACAAUAUGGCUAAGUUUGUCUGUCAUUUCUUUAGGCCAAUAUUCUGUCUGACUAUGCUACUUCAGUAUCAG
Get precursor sequence
Structure
        10         20         30         40        50         
AGUCAUCAUUCAGAAAU-   AU-      AAA  A    U-|  U         AUAUGG 
                  GGU   ACAGGA   UG CCUA  GAA UGACAGACA      \
                  UCA   UGUCUU   AC GGAU  CUU ACUGUCUGU      C
GACUAUGACUUCAUCGUA   GUC      AUA  C    UU^  U         UUGAAU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-192-P2_5p
mirBase accessionNone
Sequence 
0- AUGACCUAUGAAUUGACAGACA -22
Get sequence
Star sequence

Cja-Mir-192-P2_3p* (predicted)
mirBase accessionNone
Sequence 
37- UCUGUCAUUUCUUUAGGCCAAUA -60
Get sequence