MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-192-P2

Family name MIR-192 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-192-P1 
Orthologues Aca-Mir-192-P2  Ami-Mir-192-P2  Bta-Mir-192-P2  Cfa-Mir-192-P2  Cja-Mir-192-P2  Cli-Mir-192-P2  Cmi-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Eca-Mir-192-P2  Ete-Mir-192-P2  Gga-Mir-192-P2  Gja-Mir-192-P2  Hsa-Mir-192-P2  Lch-Mir-192-P2  Mdo-Mir-192-P2  Mml-Mir-192-P2  Mmr-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Oan-Mir-192-P2-as  Ocu-Mir-192-P2  Pab-Mir-192-P2  Pbv-Mir-192-P2  Rno-Mir-192-P2  Spt-Mir-192-P2  Sto-Mir-192-P2  Tgu-Mir-192-P2  Xla-Mir-192-P2a  Xla-Mir-192-P2b  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010098.1: 4591092-4591156 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-192-P2)
Mir-194-P2 GL010098.1: 4590894-4590951 [+] UCSC Ensembl
Mir-192-P2 GL010098.1: 4591092-4591156 [+] UCSC Ensembl
Seed UGACCUA
Precursor
(pre-Mir +30nt flank)
UCGGGCUGCCAAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCCCUCGGCUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUUCCAGCAGCCAGGA
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Structure
        10          20        30          40        50        60 
UCGGGCUGCCAAGACCGA--   C   GG   C-        -|     A     AGUGCCCUC 
                    GUG ACA  GCU  UGACCUAU GAAUUG CAGCC         G
                    CGC UGU  UGG  ACUGGAUA CUUAAC GUCGG         G
AGGACCGACGACCUUAACUC   U   A-   AC        C^     C     UCUCCCCUC 
   120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Wh
Mature sequence

Laf-Mir-192-P2_5p

mirBase accessionNone
Sequence
0- CUGACCUAUGAAUUGACAGCC -21
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Star sequence

Laf-Mir-192-P2_3p*

mirBase accessionNone
Sequence
43- CUGCCAAUUCCAUAGGUCACAG -65
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