MirGeneDB 2.1
MirGeneDB ID

Ami-Mir-192-P2

Family name MIR-192 (all species)
Seed GACCUAU
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-192
Paralogues Ami-Mir-192-P1 
Orthologues Bta-Mir-192-P2  Cfa-Mir-192-P2  Cpi-Mir-192-P2  Cpo-Mir-192-P2  Dno-Mir-192-P2  Dre-Mir-192-P2b  Ete-Mir-192-P2  Gja-Mir-192-P2  Gmo-Mir-192-P2b  Hsa-Mir-192-P2  Loc-Mir-192-P2  Mal-Mir-192-P2b  Mml-Mir-192-P2  Mmu-Mir-192-P2  Mun-Mir-192-P2  Oan-Mir-192-P2  Ocu-Mir-192-P2  Rno-Mir-192-P2  Sha-Mir-192-P2  Spt-Mir-192-P2  Tni-Mir-192-P2b-v1  Tni-Mir-192-P2b-v2  Xla-Mir-192-P2c  Xla-Mir-192-P2d  Xtr-Mir-192-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017714301.1: 23381-23442 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-192-P2)		 Mir-192-P2 NW_017714301.1: 23381-23442 [-] UCSC
Mir-194-P2 NW_017714301.1: 24491-24548 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCAGCCCCCCAGAUUGCGUGCAUGGGGCUAUGACCUAUGGAUUGACAGCCAGUAUCGGAGCCUCGCCCUGGCUGUCUGUUCUAUAGGGCAUAGGACUGGGCGCACCCGUGGCGGGGGGCAGG
Get precursor sequence
Structure
        10          20        30        40         50          
CCAGCCCCCCAGAUUGC--    AU  GG     A        UU-|        UAUCGGA 
                   GUGC  GG  CUAUG CCUAUGGA   GACAGCCAG       \
                   CGCG  UC  GAUAC GGAUAUCU   CUGUCGGUC       G
GGACGGGGGGCGGUGCCCA    GG  AG     G        UGU^        CCGCUCC 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThe Drosha cut is +1 relative to most other vertebrates examined. There is also a second Dicer cut read -3 on the 3p arm but without corresponding 5p reads.
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ami-Mir-192-P2_5p
mirBase accessionMIMAT0038206
Sequence 
0- UGACCUAUGGAUUGACAGCCAGU -23
Get sequence
Star sequence

Ami-Mir-192-P2_3p*
mirBase accessionMIMAT0038207
Sequence 
38- UGGCUGUCUGUUCUAUAGGGCAUA -62
Get sequence