MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-17-P4c

Family name MIR-17 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-17-P1a  Neu-Mir-17-P1c  Neu-Mir-17-P2a  Neu-Mir-17-P2c  Neu-Mir-17-P4a 
Orthologues Aca-Mir-17-P4c  Ami-Mir-17-P4c  Bta-Mir-17-P4c  Cfa-Mir-17-P4c  Cja-Mir-17-P4c  Cli-Mir-17-P4c  Cmi-Mir-17-P4c  Cpi-Mir-17-P4c  Cpo-Mir-17-P4c  Dno-Mir-17-P4c  Dre-Mir-17-P4c  Eca-Mir-17-P4c  Ete-Mir-17-P4c  Gga-Mir-17-P4c  Gja-Mir-17-P4c  Gmo-Mir-17-P4c  Hsa-Mir-17-P4c  Laf-Mir-17-P4c  Lch-Mir-17-P4c  Loc-Mir-17-P4c  Mal-Mir-17-P4c  Mdo-Mir-17-P4c  Mml-Mir-17-P4c  Mmr-Mir-17-P4c  Mmu-Mir-17-P4c  Oan-Mir-17-P4c  Ocu-Mir-17-P4c  Pab-Mir-17-P4c  Pbv-Mir-17-P4c  Rno-Mir-17-P4c  Sha-Mir-17-P4c  Spt-Mir-17-P4c  Sto-Mir-17-P4c  Tgu-Mir-17-P4c  Xla-Mir-17-P4c3  Xla-Mir-17-P4c4  Xtr-Mir-17-P4c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 56056979-56057039 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-17-P4c)		 Mir-92-P2c CM051820.1: 56056529-56056592 [-] UCSC Ensembl
Mir-92-P1c CM051820.1: 56056667-56056731 [-] UCSC Ensembl
Mir-19-P2c CM051820.1: 56056827-56056885 [-] UCSC Ensembl
Mir-17-P4c CM051820.1: 56056979-56057039 [-] UCSC Ensembl
Mir-17-P2c CM051820.1: 56057243-56057307 [-] UCSC Ensembl
Mir-17-P1c CM051820.1: 56057428-56057485 [-] UCSC Ensembl
Seed AAAGUGC
Precursor
(pre-Mir +30nt flank)		 
GUGGAGGCUGGUCCCUGGUCCUGGUAGUGCCAAAGUGCUCAUAGUGCAGGUAGUUUUUUGCAAAUAACUACUGUACUAUGGGCACUUCAGCGCUCCUGGGUAAUGUAUCACUGGGGGGUGG
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Structure
        10          20        30        40        50        60
GUGGAGGCUGGUCCCUGGU--| UG U     CA                 G   UUUUUU 
                     CC  G AGUGC  AAGUGCUCAUAGUGCAG UAG      G
                     GG  C UCGCG  UUCACGGGUAUCAUGUC AUC      C
GGUGGGGGGUCACUAUGUAAU^ GU C     AC                 -   AAUAAA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-17-P4c_5p
mirBase accessionNone
Sequence 
0- CAAAGUGCUCAUAGUGCAGGUAG -23
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Star sequence

Neu-Mir-17-P4c_3p* (predicted)
mirBase accessionNone
Sequence 
39- ACUGUACUAUGGGCACUUCAGC -61
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