MirGeneDB 3.0
MirGeneDB ID

Neu-Mir-19-P2c

Family name MIR-19 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-19-P1a 
Orthologues Aca-Mir-19-P2c  Ami-Mir-19-P2c  Bta-Mir-19-P2c  Cfa-Mir-19-P2c  Cja-Mir-19-P2c  Cli-Mir-19-P2c  Cmi-Mir-19-P2c  Cpi-Mir-19-P2c  Cpo-Mir-19-P2c  Dno-Mir-19-P2c  Dre-Mir-19-P2c  Eca-Mir-19-P2c  Ete-Mir-19-P2c  Gga-Mir-19-P2c  Gja-Mir-19-P2c  Gmo-Mir-19-P2c  Hsa-Mir-19-P2c  Laf-Mir-19-P2c  Lch-Mir-19-P2c  Mdo-Mir-19-P2c  Mml-Mir-19-P2c  Mmr-Mir-19-P2c  Mmu-Mir-19-P2c  Mun-Mir-19-P2c  Oan-Mir-19-P2c  Ocu-Mir-19-P2c  Pab-Mir-19-P2c  Pbv-Mir-19-P2c  Rno-Mir-19-P2c  Sha-Mir-19-P2c  Spt-Mir-19-P2c  Sto-Mir-19-P2c  Tgu-Mir-19-P2c  Xla-Mir-19-P2c3  Xla-Mir-19-P2c4  Xtr-Mir-19-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)		 CM051820.1: 56056827-56056885 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-19-P2c)		 Mir-92-P2c CM051820.1: 56056529-56056592 [-] UCSC Ensembl
Mir-92-P1c CM051820.1: 56056667-56056731 [-] UCSC Ensembl
Mir-19-P2c CM051820.1: 56056827-56056885 [-] UCSC Ensembl
Mir-17-P4c CM051820.1: 56056979-56057039 [-] UCSC Ensembl
Mir-17-P2c CM051820.1: 56057243-56057307 [-] UCSC Ensembl
Mir-17-P1c CM051820.1: 56057428-56057485 [-] UCSC Ensembl
Seed GUGCAAA
Precursor
(pre-Mir +30nt flank)		 
CUAGCAUUAAUCCCGGGGCUACUCACAGUCAGUUUUGCAGGUCUUGCAUCGGCCUAUGUCGAUUGCUGUGCAAAUCCAUGCAAAACUGAUUAUGAGGGCGUUUGCAACUGCAGUUUUCG
Get precursor sequence
Structure
        10           20        30         40        50         
CUAGCAUUAAUCCCGGG---|  A    C             -  UC     U    CUAUG 
                    GCU CUCA AGUCAGUUUUGCA GG  UUGCA CGGC     \
                    CGG GAGU UUAGUCAAAACGU CC  AACGU GUCG     U
GCUUUUGACGUCAACGUUUG^  -    A             A  UA     -    UUAGC 
       110       100         90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-19-P2c_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUUUUGCAGGUCUUGCAUCGGC -23
Get sequence
Mature sequence

Neu-Mir-19-P2c_3p
mirBase accessionNone
Sequence 
36- UGUGCAAAUCCAUGCAAAACUGA -59
Get sequence