MirGeneDB 3.0
MirGeneDB ID

Lch-Mir-214

Family name MIR-214 (all species)
Species Coelacanth (Latimeria chalumnae)
MiRBase ID
Paralogues
Orthologues Aca-Mir-214-v1  Ami-Mir-214-v1  Bta-Mir-214-v1  Cfa-Mir-214-v1  Cja-Mir-214  Cli-Mir-214-v1  Cmi-Mir-214-v1  Cpi-Mir-214-v1  Cpo-Mir-214-v1  Dno-Mir-214-v1  Dre-Mir-214-P1-v1  Eca-Mir-214-v1  Ete-Mir-214-v1  Gga-Mir-214-v1  Gja-Mir-214-v1  Gmo-Mir-214-P1  Gmo-Mir-214-P2-v1  Hsa-Mir-214-v1  Laf-Mir-214  Loc-Mir-214-v1  Mal-Mir-214-P1-v1  Mal-Mir-214-P2-v1  Mdo-Mir-214-v1  Mml-Mir-214-v1  Mmr-Mir-214-v1  Mmu-Mir-214-v1  Mun-Mir-214  Oan-Mir-214-v1  Ocu-Mir-214-v1  Pab-Mir-214  Pbv-Mir-214-v1  Rno-Mir-214-v1  Sha-Mir-214-v1  Spt-Mir-214  Sto-Mir-214-v1  Tgu-Mir-214-v1  Tni-Mir-214-P1-v1  Tni-Mir-214-P2-v1  Xla-Mir-214-P3-v1  Xla-Mir-214-P4-v1  Xtr-Mir-214-v1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(LatCha1_add)		 JH127017.1: 804756-804818 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-214)		 Mir-214 JH127017.1: 804756-804818 [-] Ensembl
Mir-199-P1 JH127017.1: 811620-811680 [-] Ensembl
Seed CAGCAGG
Precursor
(pre-Mir +30nt flank)		 
CCAGGUGGCUGGACGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAGUGACAACCA
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Structure
        10          20        30        40        50        60 
CCAGGUGGCUGGACGGA--|          U          ACA          AGAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGC        \
                   CAACAGUACAC GACGGACAGA   GGACGACAUG        C
ACCAACAGUGAGUCCGACC^          U          CAC          UCCACUCU 
 120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Star sequence

Lch-Mir-214_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGC -22
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Mature sequence

Lch-Mir-214_3p (predicted)
mirBase accessionNone
Sequence 
41- ACAGCAGGCACAGACAGGCAGU -63
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