MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-214

Family name MIR-214 (all species)
Seed GCCUGUC
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-214-v1  Aca-Mir-214-v2  Ami-Mir-214-v1  Ami-Mir-214-v2  Bta-Mir-214-v1  Bta-Mir-214-v2  Cfa-Mir-214-v1  Cfa-Mir-214-v2  Cli-Mir-214-v1  Cli-Mir-214-v2  Cmi-Mir-214-v1  Cmi-Mir-214-v2  Cpi-Mir-214-v1  Cpi-Mir-214-v2  Cpo-Mir-214-v1  Cpo-Mir-214-v2  Dno-Mir-214-v1  Dno-Mir-214-v2  Dre-Mir-214-P1-v1  Dre-Mir-214-P1-v2  Ete-Mir-214-v1  Ete-Mir-214-v2  Gga-Mir-214-v1  Gga-Mir-214-v2  Gja-Mir-214-v1  Gja-Mir-214-v2  Gmo-Mir-214-P1  Gmo-Mir-214-P2-v1  Gmo-Mir-214-P2-v2  Hsa-Mir-214-v1  Hsa-Mir-214-v2  Lch-Mir-214  Loc-Mir-214-v1  Loc-Mir-214-v2  Mal-Mir-214-P1-v1  Mal-Mir-214-P1-v2  Mal-Mir-214-P2-v1  Mal-Mir-214-P2-v2  Mdo-Mir-214-v1  Mdo-Mir-214-v2  Mml-Mir-214-v1  Mml-Mir-214-v2  Mmu-Mir-214-v1  Mmu-Mir-214-v2  Oan-Mir-214-v1  Oan-Mir-214-v2  Ocu-Mir-214-v1  Ocu-Mir-214-v2  Pbv-Mir-214-v1  Pbv-Mir-214-v2  Rno-Mir-214-v1  Rno-Mir-214-v2  Sha-Mir-214-v1  Sha-Mir-214-v2  Spt-Mir-214  Sto-Mir-214-v1  Sto-Mir-214-v2  Tgu-Mir-214-v1  Tgu-Mir-214-v2  Tni-Mir-214-P1-v1  Tni-Mir-214-P1-v2  Tni-Mir-214-P2-v1  Tni-Mir-214-P2-v2  Xla-Mir-214-P3-v1  Xla-Mir-214-P3-v2  Xla-Mir-214-P4-v1  Xla-Mir-214-P4-v2  Xtr-Mir-214-v1  Xtr-Mir-214-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Mun_miRNA_loci)
214_LR594637.1:117483832-117484094: 101-163 [+]
Precursor
(pre-Mir +30nt flank)
GGGCUUGGCUGGACGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUAGACUGACAGCC
Get precursor sequence
Structure
        10          20        30        40        50        60 
GGGCUUGGCUGGACGGA--|          U          ACA          AGAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGC        \
                   CAACAGUACAC GACGGACAGA   GGACGACAUG        C
CCGACAGUCAGAUCCGACC^          U          CAC          UCCACUCU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Mun-Mir-214_5p

mirBase accessionNone
Sequence
0- UGCCUGUCUACACUUGCUGUGC -22
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Co-mature sequence

Mun-Mir-214_3p

mirBase accessionNone
Sequence
41- ACAGCAGGCACAGACAGGCAGU -63
Get sequence