MirGeneDB

MirGeneDB ID

Hsa-Mir-214-v1

Family name MIR-214 (all species)
Seed CAGCAGG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-214
Paralogues Hsa-Mir-214-v2 
Orthologues Aca-Mir-214-v1  Ami-Mir-214-v1  Bta-Mir-214-v1  Cfa-Mir-214-v1  Cli-Mir-214-v1  Cpi-Mir-214-v1  Cpo-Mir-214-v1  Dno-Mir-214-v1  Dre-Mir-214-v1  Ete-Mir-214-v1  Gga-Mir-214-v1  Mdo-Mir-214-v1  Mml-Mir-214-v1  Mmu-Mir-214-v1  Oan-Mir-214-v1  Ocu-Mir-214-v1  Rno-Mir-214-v1  Sha-Mir-214-v1  Sto-Mir-214-v1  Tgu-Mir-214-v1  Xtr-Mir-214-v1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(hg38)
chr1: 172138816-172138878 [-] UCSC Ensembl
Clustered MiRNAs
(< 10kb from Mir-214-v1)
Mir-214-v1 chr1: 172138816-172138878 [-] UCSC Ensembl
Mir-214-v2 chr1: 172138816-172138878 [-] UCSC Ensembl
Mir-199-P3-v1 chr1: 172144554-172144614 [-] UCSC Ensembl
Mir-199-P3-v2 chr1: 172144554-172144614 [-] UCSC Ensembl
Mir-199-P3-v3 chr1: 172144554-172144614 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCCUGGCUGGACAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCGCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAAUGACAACCA
Get precursor sequence
Structure
        10          20        30        40        50        60 
GGGCCUGGCUGGACAGA--|          U          ACA          AGAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGC        \
                   CAACAGUACAC GACGGACAGA   GGACGACAUG        C
ACCAACAGUAAGUCCGACC^          U          CAC          UCCACUCG 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Bo Bo Bo Bo Br Br Ce Co Fo He Ki Li Li Lu Pa Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-214-v1_5p*

MirBase accessionMIMAT0004564
Sequence
0- UGCCUGUCUACACUUGCUGUGC -22
Get sequence
Validated targets microrna.org: MIMAT0004564
TargetScanVert: hsa-miR-214-5p
TargetMiner: hsa-miR-214-5p
miRDB: MIMAT0004564
Mature sequence

Hsa-Mir-214-v1_3p

MirBase accessionMIMAT0000271
Sequence
41- ACAGCAGGCACAGACAGGCAGU -63
Get sequence
Validated targets microrna.org: MIMAT0000271
TargetScanVert: hsa-miR-214-3p
TargetMiner: hsa-miR-214-3p
miRDB: MIMAT0000271