MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-214

Family name MIR-214 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-214
Paralogues
Orthologues Aca-Mir-214-v1  Ami-Mir-214-v1  Bta-Mir-214-v1  Cfa-Mir-214-v1  Cja-Mir-214  Cli-Mir-214-v1  Cmi-Mir-214-v1  Cpi-Mir-214-v1  Cpo-Mir-214-v1  Dno-Mir-214-v1  Eca-Mir-214-v1  Ete-Mir-214-v1  Gja-Mir-214-v1  Hsa-Mir-214-v1  Laf-Mir-214  Lch-Mir-214  Loc-Mir-214-v1  Mdo-Mir-214-v1  Mml-Mir-214-v1  Mmr-Mir-214-v1  Mmu-Mir-214-v1  Mun-Mir-214  Oan-Mir-214-v1  Ocu-Mir-214-v1  Pab-Mir-214  Pbv-Mir-214-v1  Rno-Mir-214-v1  Sha-Mir-214-v1  Spt-Mir-214  Sto-Mir-214-v1  Tgu-Mir-214-v1  Xtr-Mir-214-v1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Gallus_gallus.GRCg6a)		 8: 5026506-5026568 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-214-v1)		 Mir-199-P1-v1 8: 5020651-5020711 [+] UCSC Ensembl
Mir-199-P1-v2 8: 5020651-5020711 [+] UCSC Ensembl
Mir-199-P1-v3 8: 5020651-5020711 [+] UCSC Ensembl
Mir-214-v1 8: 5026506-5026568 [+] UCSC Ensembl
Mir-214-v2 8: 5026506-5026568 [+] UCSC Ensembl
Variant

Gga-Mir-214-v1
Seed CAGCAGG
Precursor
(pre-Mir +30nt flank)		 
GGGACUGGCUGGACGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAGUGACAGCCG
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Structure
        10          20        30        40        50        60 
GGGACUGGCUGGACGGA--|          U          ACA          AGAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGC        \
                   CAACAGUACAC GACGGACAGA   GGACGACAUG        C
GCCGACAGUGAGUCCGACC^          U          CAC          UCCACUCU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-214-v1_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGC -22
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Mature sequence

Gga-Mir-214-v1_3p
mirBase accessionMIMAT0007751
Sequence 
41- ACAGCAGGCACAGACAGGCAGU -63
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Proposed targets TargetScanVert: gga-miR-214
miRDB: MIMAT0007751
Variant

Gga-Mir-214-v2
Seed ACAGCAG
Precursor
(pre-Mir +30nt flank)		 
GGGACUGGCUGGACGGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCUCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCUGAGUGACAGCCG
Get precursor sequence
Structure
        10          20        30        40        50        60 
GGGACUGGCUGGACGGA--|          U          ACA           GAACAUC 
                   GUUGUCAUGUG CUGCCUGUCU   CUUGCUGUGCA       \
                   CAACAGUACAC GACGGACAGA   GGACGACAUGU       C
GCCGACAGUGAGUCCGACC^          U          CAC           CCACUCU 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-214-v2_5p*
mirBase accessionNone
Sequence 
0- UGCCUGUCUACACUUGCUGUGCA -23
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Mature sequence

Gga-Mir-214-v2_3p
mirBase accessionMIMAT0007751
Sequence 
40- UACAGCAGGCACAGACAGGCAGU -63
Get sequence
Proposed targets TargetScanVert: gga-miR-214
miRDB: MIMAT0007751