MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-217-v1

Family name MIR-217 (all species)
Seed ACUGCAU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-217
Paralogues Dre-Mir-217-v2 
Orthologues Aca-Mir-217-v1  Ami-Mir-217-v1  Bfl-Mir-217  Bla-Mir-217  Bta-Mir-217-v1  Cfa-Mir-217-v1  Cli-Mir-217-v1  Cmi-Mir-217  Cpi-Mir-217-v1  Cpo-Mir-217-v1  Dno-Mir-217-v1  Ete-Mir-217-v1  Gga-Mir-217-v1  Gja-Mir-217-v1  Gmo-Mir-217  Hsa-Mir-217-v1  Lch-Mir-217  Loc-Mir-217  Mal-Mir-217  Mdo-Mir-217  Mml-Mir-217-v1  Mmu-Mir-217-v1  Mun-Mir-217-v1  Oan-Mir-217-v1  Ocu-Mir-217-v1  Pbv-Mir-217-v1  Rno-Mir-217-v1  Sha-Mir-217-v1  Spt-Mir-217  Sto-Mir-217-v1  Tgu-Mir-217-v1  Tni-Mir-217  Xtr-Mir-217-v1 
Node of Origin (locus) Chordata
Node of Origin (family) Chordata
Genome context
(danRer11)		 chr22: 28779730-28779788 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-217-v1)		 Mir-217-v1 chr22: 28779730-28779788 [-] UCSC Ensembl
Mir-217-v2 chr22: 28779730-28779789 [-] UCSC Ensembl
Mir-216-P2b chr22: 28779961-28780023 [-] UCSC Ensembl
Mir-216-P2a chr22: 28780265-28780323 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCUGCAUGAGAACUUUCUGAUGUUGGUGAUACUGCAUCAGGAACUGAUUGGAUGAUAUUCAGGAGCCAUCAGUUCCUGAUGCACUCCCAUCAGCAUCGAAAGAGACACCUGUGAGUUU
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Structure
        10          20        30        40        50         
AGCUGCAUGAGAACUUUC--|          AUAC                U  AUGAUA 
                    UGAUGUUGGUG    UGCAUCAGGAACUGAU GG      U
                    GCUACGACUAC    ACGUAGUCCUUGACUA CC      U
UUUGAGUGUCCACAGAGAAA^          CCUC                -  GAGGAC 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-217-v1_5p
mirBase accessionMIMAT0001285
Sequence 
0- UACUGCAUCAGGAACUGAUUGGA -23
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Proposed targets TargetScanFish: dre-miR-217
Star sequence

Dre-Mir-217-v1_3p*
mirBase accessionNone
Sequence 
37- CAUCAGUUCCUGAUGCACUCCC -59
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