MirGeneDB 2.1
MirGeneDB ID

Cli-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Rock pigeon (Columba livia)
MiRBase ID
Paralogues Cli-Mir-460-P2 
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cpi-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gja-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Loc-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Mun-Mir-460-P1  Oan-Mir-460-P1  Sha-Mir-460-P1  Spt-Mir-460-P1  Tgu-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(colLiv2)		 scaffold517: 1526048-1526106 [+]
Precursor
(pre-Mir +30nt flank)
GCUGAUGGGGAGAUACCUGACUUUAUAGCACCUGCAUUGUACACACUGUGUGUAUUGACUGGAAAUGCACAGCGCAUACAAUGUGGAUUCUGUAGAAGUCACUCACGGCACCGCCGCCC
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Structure
        10         20         30        40        50         
GCUGAUGGGGAGAUACC-    -|      CAC UG       CACA      GUAUUGA 
                  UGAC UUUAUAG   C  CAUUGUA    CUGUGU       \
                  ACUG AGAUGUC   G  GUAACAU    GACACG       C
CCCGCCGCCACGGCACUC    A^      UUA GU       ACGC      UAAAGGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Cl Cl Cl Cl Cl To
Mature sequence

Cli-Mir-460-P1_5p
mirBase accessionNone
Sequence 
0- CCUGCAUUGUACACACUGUGUG -22
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Star sequence

Cli-Mir-460-P1_3p*
mirBase accessionNone
Sequence 
37- CACAGCGCAUACAAUGUGGAUU -59
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