MirGeneDB 3.0

20 microRNA genes with seed CUGCAUU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Aca-Mir-460-P1 aca-mir-460a MIR-460 CUGCAUU MIMAT0021970 MIMAT0021971 GL343687.1 195346 195404 - Osteichthyes Osteichthyes No 1
Ami-Mir-460-P1 ami-mir-460a MIR-460 CUGCAUU MIMAT0038292 None NW_017714292.1 2458944 2459002 + Osteichthyes Osteichthyes Unknown 1
Cli-Mir-460-P1 None MIR-460 CUGCAUU None None scaffold517 1526048 1526106 + Osteichthyes Osteichthyes No 1
Cpi-Mir-460-P1 cpi-mir-460a MIR-460 CUGCAUU MIMAT0037894 MIMAT0037895 JH584507 211097 211155 - Osteichthyes Osteichthyes No 1
Gga-Mir-460-P1 gga-mir-460a MIR-460 CUGCAUU MIMAT0003778 MIMAT0026646 2 3746362 3746420 + Osteichthyes Osteichthyes No 1 1
Gja-Mir-460-P1 None MIR-460 CUGCAUU None None NW_015160073.1 152 210 - Osteichthyes Osteichthyes No 1
Gmo-Mir-460-P1 gmo-mir-460 MIR-460 CUGCAUU MIMAT0044248 MIMAT0044249 GeneScaffold_377 671954 672012 + Osteichthyes Osteichthyes Yes 1 1
Lch-Mir-460-P1 None MIR-460 CUGCAUU None None JH127327.1 714315 714373 + Osteichthyes Osteichthyes Unknown
Loc-Mir-460-P1 None MIR-460 CUGCAUU None None LG9 23488493 23488550 - Osteichthyes Osteichthyes No 1
Mal-Mir-460-P1 None MIR-460 CUGCAUU None None KV884702.1 4251764 4251822 + Osteichthyes Osteichthyes Unknown 1 1
Mdo-Mir-460-P1 mdo-mir-460 MIR-460 CUGCAUU MIMAT0012758 MIMAT0026945 6 197334861 197334917 - Osteichthyes Osteichthyes Yes 1
Mun-Mir-460-P1 None MIR-460 CUGCAUU None None LR594632.1 51248036 51248094 + Osteichthyes Osteichthyes Yes 1
Neu-Mir-460-P1 None MIR-460 CUGCAUU None None CM051813.1 11472193 11472250 + Osteichthyes Osteichthyes No 1
Oan-Mir-460-P1 oan-mir-460 MIR-460 CUGCAUU MIMAT0006915 MIMAT0006916 NC_041740.1 1810852 1810908 + Osteichthyes Osteichthyes Yes 1
Sha-Mir-460-P1 None MIR-460 CUGCAUU None None GL841580.1 38710 38767 - Osteichthyes Osteichthyes No 1
Spt-Mir-460-P1 None MIR-460 CUGCAUU None None QEPC01003143.1 274335 274393 + Osteichthyes Osteichthyes Unknown 1
Tgu-Mir-460-P1 tgu-mir-460a MIR-460 CUGCAUU MIMAT0014614 MIMAT0014658 2 1265309 1265366 - Osteichthyes Osteichthyes No 1 1
Xtr-Mir-460-P1 None MIR-460 CUGCAUU None None chr6 3768597 3768655 - Osteichthyes Osteichthyes No 1
Xla-Mir-460-P1a None MIR-460 CUGCAUU None None NC_030734.1 4709482 4709540 + X. laevis Osteichthyes No 1 1
Xla-Mir-460-P1b None MIR-460 CUGCAUU None None NC_030735.1 3951266 3951324 + X. laevis Osteichthyes No 1 1

(red - mature/co-mature, blue - star)

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