| MirGeneDB ID | Oan-Mir-460-P1 |
|---|
| Family name |
MIR-460 (all species) |
|---|
| Species |
Platypus (Ornithorhynchus anatinus) |
|---|
| MiRBase ID |
oan-mir-460
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aca-Mir-460-P1
Ami-Mir-460-P1
Cli-Mir-460-P1
Cpi-Mir-460-P1
Dre-Mir-460-P1
Gga-Mir-460-P1
Gja-Mir-460-P1
Gmo-Mir-460-P1
Lch-Mir-460-P1
Loc-Mir-460-P1
Mal-Mir-460-P1
Mdo-Mir-460-P1
Mun-Mir-460-P1
Neu-Mir-460-P1
Sha-Mir-460-P1
Spt-Mir-460-P1
Tgu-Mir-460-P1
Tni-Mir-460-P1
Xla-Mir-460-P1a
Xla-Mir-460-P1b
Xtr-Mir-460-P1
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
|---|
| Node of Origin (family) |
Osteichthyes
|
|---|
Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041740.1: 1810852-1810908 [+]
|
|---|
| Seed |
CUGCAUU |
|---|
Precursor
(pre-Mir +30nt flank) |
CCCUCCCCGGUGCCGCCUGACUGUAUAGAACCUGCAUUGUACACACUGUGUGUCUCGCUCUCUGCACACAGCGCGUACAAUGUGGAUACUAUAGAAGUCACUGACUCCUCUACACCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCCUCCCCGGUGCCGCCU G-| AAC UG ACA UCUCG
GACU UAUAG C CAUUGUAC CUGUGUG C
CUGA AUAUC G GUAACAUG GACACAC U
ACCACAUCUCCUCAGUCA AG^ AUA GU CGC GUCUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Oan-Mir-460-P1_5p |
| mirBase accession | MIMAT0006915 |
|---|
| Sequence |
0- CCUGCAUUGUACACACUGUGUG -22
Get sequence
|
|---|
| Star sequence |
Oan-Mir-460-P1_3p* |
| mirBase accession | MIMAT0006916 |
|---|
| Sequence |
36- CACAGCGCGUACAAUGUGGAU -57
Get sequence
|
|---|
