MirGeneDB 2.1
MirGeneDB ID

Mun-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-460-P2 
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cli-Mir-460-P1  Cpi-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gja-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Loc-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Oan-Mir-460-P1  Sha-Mir-460-P1  Spt-Mir-460-P1  Tgu-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Mun_miRNA_loci)		 460-P1_LR594632.1:51247936-51248194: 101-159 [+]
Precursor
(pre-Mir +30nt flank)
GUUUCAGCCUCAAUGUCUGACCUUAUAGGACCUGCAUUGUACACACUGUGCGUAUUGUUUGGGCAUGCACAGCGCAUACAAUGUGGAUGCUAUAGAAGUCAAAUGCAGCACCAGCACCC
Get precursor sequence
Structure
        10         20         30        40        50         
GUUUCAGCCUCAAUGUC-    C-|     GAC UG       CACA       UAUUGU 
                  UGAC  UUAUAG   C  CAUUGUA    CUGUGCG      \
                  ACUG  GAUAUC   G  GUAACAU    GACACGU      U
CCCACGACCACGACGUAA    AA^     GUA GU       ACGC       ACGGGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-460-P1_5p
mirBase accessionNone
Sequence 
0- CCUGCAUUGUACACACUGUGCG -22
Get sequence
Star sequence

Mun-Mir-460-P1_3p*
mirBase accessionNone
Sequence 
37- CACAGCGCAUACAAUGUGGAUG -59
Get sequence