MirGeneDB 2.1
MirGeneDB ID

Cpi-Mir-460-P1

Family name MIR-460 (all species)
Seed CUGCAUU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-460a
Paralogues Cpi-Mir-460-P2 
Orthologues Aca-Mir-460-P1  Ami-Mir-460-P1  Cli-Mir-460-P1  Dre-Mir-460-P1  Gga-Mir-460-P1  Gja-Mir-460-P1  Gmo-Mir-460-P1  Lch-Mir-460-P1  Loc-Mir-460-P1  Mal-Mir-460-P1  Mdo-Mir-460-P1  Mun-Mir-460-P1  Oan-Mir-460-P1  Sha-Mir-460-P1  Spt-Mir-460-P1  Tgu-Mir-460-P1  Tni-Mir-460-P1  Xla-Mir-460-P1a  Xla-Mir-460-P1b  Xtr-Mir-460-P1 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(chrPic1)		 JH584507: 211097-211155 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCAAGGGGAGAGACCUGACUUUAUAGAACCUGCAUUGUACACACUGUGUGUAUUGAUUGGACAUGCACAGCGCAUACAAUGUGGAUACUGUAGACGUCAAUGACAGCAUCGCCACCC
Get precursor sequence
Structure
        10         20         30        40        50         
GCUCAAGGGGAGAGACC-    -|      AAC UG       CACA      GUAUUGA 
                  UGAC UUUAUAG   C  CAUUGUA    CUGUGU       \
                  ACUG AGAUGUC   G  GUAACAU    GACACG       U
CCCACCGCUACGACAGUA    C^      AUA GU       ACGC      UACAGGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-460-P1_5p
mirBase accessionMIMAT0037894
Sequence 
0- CCUGCAUUGUACACACUGUGUG -22
Get sequence
Star sequence

Cpi-Mir-460-P1_3p*
mirBase accessionMIMAT0037895
Sequence 
37- CACAGCGCAUACAAUGUGGAUA -59
Get sequence