MirGeneDB 3.0
53 microRNA genes with node of origin H. melpomene
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Hme-Mir-3-P14 None MIR-3 CACUGGG None None HE671859 113699 113757 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P15 None MIR-3 CACUGGG None None HE671859 113451 113508 - H. melpomene Pancrustacea No 1 1
Hme-Mir-3-P16 None MIR-3 CACUGGG None None HE671859 113306 113364 - H. melpomene Pancrustacea No 1 1
Hme-Mir-3-P17 None MIR-3 CACUGGG None None HE671859 113173 113233 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P18 None MIR-3 CACUGGG None None HE671859 112729 112787 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P19 None MIR-3 CACUGGG None None HE671859 112455 112513 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P20 None MIR-3 CACUGGG None None HE671859 112283 112342 - H. melpomene Pancrustacea No
Hme-Mir-3-P21 None MIR-3 CACUGGG None None HE671859 112176 112234 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P22 None MIR-3 CACUGGU None None HE671859 111736 111797 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P23 None MIR-3 UAGUCAU None None HE671859 111487 111543 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P24 None MIR-3 CACUGGG None None HE671859 110937 110990 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P25 None MIR-3 CACUGGG None None HE671859 110796 110850 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P26 None MIR-3 CACUGGG None None HE671859 110635 110693 - H. melpomene Pancrustacea No
Hme-Mir-3-P27 hme-mir-2733 MIR-3 CACUGGG None MIMAT0024951 HE671859 110477 110535 - H. melpomene Pancrustacea Unknown
Hme-Mir-33-P8 hme-mir-33-1 MIR-33 UGCAUUG MIMAT0024980 None HE670818 67948 68008 + H. melpomene Bilateria No 1
Hme-Mir-33-P9 hme-mir-33-2 MIR-33 UGCAUUG MIMAT0024980 None HE671035 83696 83756 - H. melpomene Bilateria No 1
Hme-Mir-34-P11 hme-mir-34-1 MIR-34 GGCAGUG MIMAT0024983 None HE667979 380 438 - H. melpomene Bilateria No 1
Hme-Mir-34-P12 hme-mir-34-2 MIR-34 GGCAGUG MIMAT0024983 None HE669997 8038 8096 + H. melpomene Bilateria No 1 1
Hme-Mir-210-P3 hme-mir-210 MIR-210 UUGUGCG None MIMAT0024947 HE670563 209742 209798 - H. melpomene Bilateria No 1
Hme-Mir-210-P4 hme-mir-3286 MIR-210 UGUGCGU None MIMAT0024979 HE670563 208640 208703 - H. melpomene Bilateria No 1
Hme-Mir-279-o1 hme-mir-279a MIR-279 GACUAGA None MIMAT0024961 HE668381 19337 19392 - H. melpomene Protostomia No 1
Hme-Mir-279-o2 hme-mir-279c MIR-279 GACUAGA None MIMAT0024966 HE671887 111974 112030 + H. melpomene Protostomia No 1 1
Hme-Mir-989-P1 None MIR-989 GUGAUGU None None FARY01123984.1 1726 1785 - H. melpomene Endopterygota No 1
Hme-Mir-989-P2 None MIR-989 GUGAUGU None None FARY01123984.1 1092 1151 - H. melpomene Endopterygota No 1
Hme-Mir-2755 hme-mir-2755 MIR-2755 ACCCUGU None MIMAT0024952 HE671518 150664 150723 - H. melpomene H. melpomene No
Hme-Mir-2756 hme-mir-2756 MIR-2756 CCCUGUA MIMAT0024953 None HE672079 296638 296695 + H. melpomene H. melpomene No 1
Hme-Mir-2763 V hme-mir-2763 MIR-2763 AUUAUGC None MIMAT0024955 HE672065 139460 139521 - H. melpomene H. melpomene 2 No 1 1
Hme-Mir-2766-P1 None MIR-2766 CAGUCUU None None HE670389 111848 111906 + H. melpomene H. melpomene No 1
Hme-Mir-2766-P2 None MIR-2766 CAGUCUU None None HE670430 103144 103202 - H. melpomene H. melpomene No 1
Hme-Mir-2767 hme-mir-2767 MIR-2767 AAGUAAA MIMAT0024957 None HE671115 285746 285800 + H. melpomene H. melpomene No 1
Hme-Mir-2786 None MIR-2786 UCUCUCG None None HE671033 61257 61318 + H. melpomene H. melpomene Unknown 1 1
Hme-Mir-3327 hme-mir-3327 MIR-3327 UAUGUAA MIMAT0024981 None HE671311 86391 86452 - H. melpomene H. melpomene No 1
Hme-Mir-3338 hme-mir-3338 MIR-3338 UGUACUU None MIMAT0024982 HE671311 86526 86586 - H. melpomene H. melpomene No 1
Hme-Mir-6301-P1 hme-mir-6301-2 MIR-6301 CAGUUCA MIMAT0026470 MIMAT0025005 HE671389 229572 229629 - H. melpomene H. melpomene No 1 1
Hme-Mir-6301-P2 hme-mir-6301-1 MIR-6301 CAGUUCA MIMAT0025004 MIMAT0025005 HE671389 229326 229379 - H. melpomene H. melpomene No 1 1
Hme-Mir-6302-P1 hme-mir-6302-2 MIR-6302 AAACUCA MIMAT0026464 MIMAT0025007 HE671389 230471 230526 - H. melpomene H. melpomene No 1
Hme-Mir-6302-P2 hme-mir-6302-1 MIR-6302 AAACUCA MIMAT0025006 MIMAT0025007 HE671389 229935 229991 - H. melpomene H. melpomene No 1
Hme-Mir-6304 hme-mir-6304 MIR-6304 UUCCAGU None MIMAT0025009 HE670412 210116 210172 + H. melpomene H. melpomene No 1 1
Hme-Mir-6305 hme-mir-6305 MIR-6305 UAUGCUA MIMAT0025010 MIMAT0025011 HE670942 235843 235906 - H. melpomene H. melpomene No 1
Hme-Mir-6307 hme-mir-6307 MIR-6307 AAGCUCG None MIMAT0025014 HE670993 20663 20723 - H. melpomene H. melpomene No 1
Hme-Mir-10485 None MIR-10485 CAGUCUA None None HE670498 254375 254430 + H. melpomene H. melpomene No 1
Hme-Novel-1 None HME-NOVEL-1 UUCGCCU None None HE672018 201434 201493 + H. melpomene H. melpomene No 1
Hme-Novel-2 None HME-NOVEL-2 CCAAUAA None None HE671335 621364 621419 + H. melpomene H. melpomene No
Hme-Novel-3 None HME-NOVEL-3 GCGGAGA None None HE671335 621504 621559 - H. melpomene H. melpomene No 1
Hme-Novel-4 None HME-NOVEL-4 UGAUGAU None None HE671687 151159 151219 + H. melpomene H. melpomene No 1
Hme-Novel-5-P1 None HME-NOVEL-5 UUGCCUU None None HE671980 160985 161040 - H. melpomene H. melpomene No 1
Hme-Novel-5-P2 None HME-NOVEL-5 UUGCCUU None None HE671980 160796 160851 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P3a None HME-NOVEL-5 UUGCCUU None None HE671980 160606 160661 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P3b None HME-NOVEL-5 UUGCCUU None None HE671980 160418 160473 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P4 None HME-NOVEL-5 UUGCCUU None None HE671980 160228 160283 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P5 None HME-NOVEL-5 UUGCCUU None None HE671980 159936 159991 - H. melpomene H. melpomene No 1 1
Hme-Novel-6 None HME-NOVEL-6 AGUCGAG None None HE672042 72357 72421 + H. melpomene H. melpomene No
Hme-Novel-7 None HME-NOVEL-7 UGCGUUG None None HE672065 650060 650136 - H. melpomene H. melpomene No 1

(red - mature/co-mature, blue - star)

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