| MirGeneDB ID | Hme-Novel-6 |
|---|
| Family name |
HME-NOVEL-6 (all species) |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
|
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| Node of Origin (family) |
H. melpomene
|
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Genome context
(Hmel_1) |
HE672042: 72357-72421 [+]
Ensembl
|
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| Seed |
AGUCGAG |
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Precursor
(pre-Mir +30nt flank) |
GGAUUGUGGGUUCGAGUCCCACCAGGGGUAGCUUUUUCUAGGUCUCAAUUGGUUUUAAAUUUUAAUAAAAGCAGUCGAGAUCUAGAAAAAGAUUAUUAAAAUUGAUAACCUUAAAAACAUUUUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGAUUGUGGGUUCGAGUCC-- CCAGG -| A G UUUAAAU
CA GGUAG CUUUUUCUAGGUCUC AUUG U U
GU UUAUU GAAAAAGAUCUAGAG UGAC A U
UUUUUUACAAAAAUUCCAAUA UAAAA A^ C G AAAUAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Hme-Novel-6_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCUUUUUCUAGGUCUCAAUUGGU -23
Get sequence
|
|---|
| Mature sequence |
Hme-Novel-6_3p |
| mirBase accession | None |
|---|
| Sequence |
41- CAGUCGAGAUCUAGAAAAAGAUUA -65
Get sequence
|
|---|
