MirGeneDB 2.1

MirGeneDB ID

Hme-Novel-2

Family name HME-NOVEL-2 (all species)
Seed CCAAUAA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)
HE671335: 621364-621419 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUUUAUAUAGCAUCGCCUUUAUAUAGCUUCGCUGUUCCCGUUAUUUGCGUUGGUAUUUUCAAUCCAAUAAUGGGAAAGGUGAAGCUAAUGGGCUUCUGCAAGUCGGCCACAAGC
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Structure
        10             20        30        40        50        
GCCUUUAUAUAGCAUCG-----|  UUAUA          G           U C   GGUA 
                      CCU     UAGCUUCGCU UUCCCGUUAUU G GUU    \
                      GGG     AUCGAAGUGG AAGGGUAAUAA C UAA    U
CGAACACCGGCUGAACGUCUUC^  UA---          A           - C   CUUU 
    110       100        90           80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Novel-2_5p*

mirBase accessionNone
Sequence
0- UCGCUGUUCCCGUUAUUUGCGUU -23
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Mature sequence

Hme-Novel-2_3p

mirBase accessionNone
Sequence
34- UCCAAUAAUGGGAAAGGUGAAG -56
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