MirGeneDB 3.0

MirGeneDB ID

Hme-Mir-6302-P1

Family name MIR-6302 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-6302-2
Paralogues Hme-Mir-6302-P2 
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)
HE671389: 230471-230526 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-6302-P1)
Mir-6301-P2 HE671389: 229326-229379 [-] Ensembl
Mir-6301-P1 HE671389: 229572-229629 [-] Ensembl
Mir-6302-P2 HE671389: 229935-229991 [-] Ensembl
Mir-6302-P1 HE671389: 230471-230526 [-] Ensembl
Seed AAACUCA
Precursor
(pre-Mir +30nt flank)
UGGGUAUGCAAGAAAAAACAUGUGAGGUGGAGGUUGACGGGGGGUUUGCAAGUAUAAACCACUGCAAACUCAUCGUCAGCCUUCUCACCUUUCAUGAUCAAUCUACAGAAGAAGGA
Get precursor sequence
Structure
        10          20         30         40        50      
UGGGUAUGCAAGAAAAAA--    U      - -|        GG         AGUAU 
                    CAUG GAGGUG G AGGUUGACG  GGGUUUGCA     A
                    GUAC UUCCAC C UCCGACUGC  CUCAAACGU     A
AGGAAGAAGACAUCUAACUA    U      U U^        UA         CACCA 
    110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-6302-P1_5p*

mirBase accessionMIMAT0026464
Sequence
0- AGGUUGACGGGGGGUUUGCA -20
Get sequence
Mature sequence

Hme-Mir-6302-P1_3p

mirBase accessionMIMAT0025007
Sequence
34- CAAACUCAUCGUCAGCCUUCUC -56
Get sequence