MirGeneDB 2.1

MirGeneDB ID

Hme-Mir-2786

Family name MIR-2786 (all species)
Seed UCUCUCG
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)
HE671033: 61257-61318 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAUUACAAUGGACGGUGCUUAGCUCUUCAGGUCAUGUAGGCGAAGGAAUAUGUGCAGCAUAUCUUGUACUCUCUCGCCUCCAUGACCUGAAGAAUUAAGCAAAAACUACAGAAGAUAGAA
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Structure
        10          20        30        40        50        60
AAGAUUACAAUGGACGG--|      C             U      AG  AUAUGUGCAG 
                   UGCUUAG UCUUCAGGUCAUG AGGCGA  GA          C
                   ACGAAUU AGAAGUCCAGUAC UCCGCU  CU          A
AAGAUAGAAGACAUCAAAA^      A             C      CU  CAUGUUCUAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-2786_5p*

mirBase accessionNone
Sequence
0- AGGUCAUGUAGGCGAAGGAAUA -22
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Mature sequence

Hme-Mir-2786_3p

mirBase accessionNone
Sequence
40- CUCUCUCGCCUCCAUGACCUGA -62
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