MirGeneDB 2.1
MirGeneDB ID

Hme-Mir-3-P16

Family name MIR-3 (all species)
Seed CACUGGG
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues Hme-Mir-3-P14  Hme-Mir-3-P15  Hme-Mir-3-P17  Hme-Mir-3-P18  Hme-Mir-3-P19  Hme-Mir-3-P20  Hme-Mir-3-P21  Hme-Mir-3-P22  Hme-Mir-3-P23  Hme-Mir-3-P24  Hme-Mir-3-P25  Hme-Mir-3-P26  Hme-Mir-3-P27 
Orthologues Dma-Mir-3  Dpu-Mir-3 
Node of Origin (locus) H. melpomene
Node of Origin (family) Pancrustacea
Genome context
(Hmel_1)		 HE671859: 113306-113364 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACGCAGCGCACAUUAUUACUGACAGGUUGAGCUGUUAAAUGCUUAGCAGGUAGUGUCAAAGUUCUAUCACUGGGUGUUUAACAGAUGUUACUGUUAGAAUUAAUCAACGCGUAAUUGU
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Structure
        10          20        30        40        50         
AACGCAGCGCACAUUAUUA--|      GUUGAG               CA    GUGUC 
                     CUGACAG      CUGUUAAAUGCUUAG  GGUA     A
                     GAUUGUC      GACAAUUUGUGGGUC  CUAU     A
UGUUAAUGCGCAACUAAUUAA^      AUUGUA               A-    CUUGA 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-3-P16_5p*
mirBase accessionNone
Sequence 
0- AGCUGUUAAAUGCUUAGCAGGUA -23
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Mature sequence

Hme-Mir-3-P16_3p
mirBase accessionNone
Sequence 
37- UCACUGGGUGUUUAACAGAUGU -59
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