MirGeneDB ID | Hme-Mir-2755 |
Family name |
MIR-2755 (all species) |
Species |
Longwing butterfly (Heliconius melpomene) |
MiRBase ID |
hme-mir-2755
|
Paralogues |
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Orthologues |
|
Node of Origin (locus) |
H. melpomene
|
Node of Origin (family) |
H. melpomene
|
Genome context (Hmel_1) |
HE671518: 150664-150723 [-]
Ensembl
|
Seed |
ACCCUGU |
Precursor (pre-Mir +30nt flank) |
AAGGAUAAGGAAACAUGGGUUUUGGUAGAACAAGGUGGCCUAGCAGCGUGUUUUCCUCUAAGUUUUGCACCCUGUCAGACCAUACUUGUUCUAACGUACCUAUUAUCACAAUGAAGACAC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAGGAUAAGGAAACAUG---| UU G - C AG C UUUCCUC
GGU UG UAGAACAAG GUGG CU CAG GUGU \
CCA GC AUCUUGUUC UACC GA GUC CACG U
CACAGAAGUAACACUAUUAU^ U- A A A CU C UUUUGAA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a Drosha cut -2 on the 5p arm. |
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Hme-Mir-2755_5p* |
mirBase accession | None |
Sequence |
0- CAAGGUGGCCUAGCAGCGUGUU -22
Get sequence
|
Mature sequence |
Hme-Mir-2755_3p |
mirBase accession | MIMAT0024952 |
Sequence |
37- CACCCUGUCAGACCAUACUUGUU -60
Get sequence
|