MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-425

Family name MIR-425 (all species)
Seed AUGACAC
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmu-Mir-425  Mun-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_003427355_STO_add)		 BFAA01003406.1: 122844-122905 [+]
Precursor
(pre-Mir +30nt flank)
GGUGUGUACGAGGUGGUGGCUGUCCUCUGGAAUGACACGAUCACUCCCGGUUAAGCCUAAAUAAAUAUUUACCGGGAAACUUGUGUCAGUCAAGAGGGCUUCCCAAGUCUUCAAUUGUUUCC
Get precursor sequence
Structure
        10          20        30        40        50        60 
GGUGUGUACGAGGUGGU--| CU       G  A        UCAC       UAAGCCUAA 
                   GG  GUCCUCU GA UGACACGA    UCCCGGU         \
                   CC  CGGGAGA CU ACUGUGUU    AGGGCCA         A
CCUUUGUUAACUUCUGAAC^ UU       A  G        CAA-       UUUAUAAAU 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-425_5p
mirBase accessionNone
Sequence 
0- AAUGACACGAUCACUCCCGGUUA -23
Get sequence
Star sequence

Sto-Mir-425_3p*
mirBase accessionNone
Sequence 
39- UACCGGGAAACUUGUGUCAGUCA -62
Get sequence