MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-425

Family name MIR-425 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-731
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(danRer11)		 chr8: 26082548-26082611 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-191 chr8: 26082318-26082381 [+] UCSC Ensembl
Mir-425 chr8: 26082548-26082611 [+] UCSC Ensembl
Seed AUGACAC
Precursor
(pre-Mir +30nt flank)		 
UGUGUAUCUGAUUUACUGAUGCUGAUCUGGAAUGACACGUUUUCUCCCGGAUCGCCAGAAAUAUGUUUCGCCACCGGGAACUUCGUGUCAGCCAAGAUUGGCAUCAAUUCCUGACAAUCAGAAG
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Structure
        10          20         30        40        50        60  
UGUGUAUCUGAUUUACU--     UG   -|  AA       UUUUC      AUCGCCAGAAA 
                   GAUGC  AUC UGG  UGACACG     UCCCGG           \
                   CUACG  UAG ACC  ACUGUGC     AGGGCC           U
GAAGACUAACAGUCCUUAA     GU   A^  G-       UUCA-      ACCGCUUUGUA 
  120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-425_5p
mirBase accessionMIMAT0003761
Sequence 
0- AAUGACACGUUUUCUCCCGGAUCG -24
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Proposed targets TargetScanFish: dre-miR-731
Star sequence

Dre-Mir-425_3p*
mirBase accessionNone
Sequence 
41- CACCGGGAACUUCGUGUCAGCCA -64
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