MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-425

Family name MIR-425 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635869.1: 3897454-3897514 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-425 KI635869.1: 3897454-3897514 [-] UCSC Ensembl
Mir-191 KI635869.1: 3899821-3899883 [-] UCSC Ensembl
Seed AUGACAC
Precursor
(pre-Mir +30nt flank)		 
UGACUCUCAAGACUCUCAGAUGUCCUCUGGAAUGACACGAUCACUCCCGGUUAAAGCUGACAAGAAUUUACCGGGAAACUCGUGUCAACCAAGGGGACUUCCUAACUCGUCAGCAAUGUCC
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Structure
        10          20         30        40        50        60
UGACUCUCAAGACUCUCA--  U      -|  AA        UCAC       UAAAGCUG 
                    GA GUCCUC UGG  UGACACGA    UCCCGGU        A
                    CU CAGGGG ACC  ACUGUGCU    AGGGCCA        C
CCUGUAACGACUGCUCAAUC  U      A^  A-        CAA-       UUUAAGAA 
 .       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-425_5p
mirBase accessionNone
Sequence 
0- AAUGACACGAUCACUCCCGGUUAA -24
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Co-mature sequence

Cmi-Mir-425_3p
mirBase accessionNone
Sequence 
38- UACCGGGAAACUCGUGUCAACCA -61
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