MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-425

Family name MIR-425 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-425
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009163.1: 39558612-39558674 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-191 CM009163.1: 39558147-39558210 [+] UCSC Ensembl
Mir-425 CM009163.1: 39558612-39558674 [+] UCSC Ensembl
Seed AUGACAC
Precursor
(pre-Mir +30nt flank)		 
CGUGCGCCUGCGGCAUGGAAAGCGCUUUGGAAUGACACGAUCACUCCCGUUGAGUGGGCACACAAGAAGCCAUCGGGAAUAUCGUGUCCGCCCAGUGCUCUUUCGGCGCCUCCCAGCAGGACC
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Structure
        10          20        30        40        50        60  
CGUGCGCCUGCGGCAUG--|    C  U    AAU        CAC     U  A  GGGCAC 
                   GAAAG GC UUGG   GACACGAU   UCCCG UG GU      \
                   CUUUC CG GACC   CUGUGCUA   AGGGC AC CG      A
CCAGGACGACCCUCCGCGG^    U  U    CGC        UA-     U  -  AAGAAC 
 120       110       100        90        80          70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-425_5p
mirBase accessionNone
Sequence 
0- AAUGACACGAUCACUCCCGUUGAGU -25
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Star sequence

Eca-Mir-425_3p*
mirBase accessionMIMAT0034749
Sequence 
40- CAUCGGGAAUAUCGUGUCCGCCC -63
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