MirGeneDB ID | Mun-Mir-425 |
Family name |
MIR-425 (all species) |
Seed |
AUGACAC |
Species |
Microcaecilia (Microcaecilia unicolor) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aca-Mir-425
Ami-Mir-425
Bta-Mir-425
Cfa-Mir-425
Cli-Mir-425
Cmi-Mir-425
Cpi-Mir-425
Cpo-Mir-425
Dno-Mir-425
Dre-Mir-425
Ete-Mir-425
Gga-Mir-425
Gja-Mir-425
Gmo-Mir-425
Hsa-Mir-425
Loc-Mir-425
Mal-Mir-425
Mdo-Mir-425
Mml-Mir-425
Mmu-Mir-425
Oan-Mir-425
Ocu-Mir-425
Pbv-Mir-425
Rno-Mir-425
Sha-Mir-425
Spt-Mir-425
Sto-Mir-425
Tgu-Mir-425
Tni-Mir-425
Xla-Mir-425-P1
Xla-Mir-425-P2
Xtr-Mir-425
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
|
Genome context (Mun_miRNA_loci) |
425_LR594637.1:139796983-139797121: 39-101 [-]
|
Precursor (pre-Mir +30nt flank) |
AUGAAGCCUGUUGGAGAGAACCUGCCCUGGAAUGACACGAUCACUCCCGUUGAGCAGAAAGCAAGGACGCCAUCGGGAAUAUCGUGUCUGUCCAAAGCUCUCUCGUCACCUCUCACAAGGGGA
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|
Structure | 10 20 30 40 50 60
AUGAAGCCUGUUGGAGA--| ACCU CC AU CAC U A AGAAAG
GA GC UGGA GACACGAU UCCCG UG GC \
CU CG ACCU CUGUGCUA AGGGC AC CG C
AGGGGAACACUCUCCACUG^ CUCU AA GU UA- U - CAGGAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mun-Mir-425_5p |
mirBase accession | None |
Sequence |
0- AAUGACACGAUCACUCCCGUUGAGC -25
Get sequence
|
Star sequence |
Mun-Mir-425_3p* |
mirBase accession | None |
Sequence |
40- CAUCGGGAAUAUCGUGUCUGUCC -63
Get sequence
|