MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-425

Family name MIR-425 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gga-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(DEVIL_add)		 GL841583.1: 1571636-1571698 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-2970 GL841583.1: 1571177-1571235 [-] UCSC Ensembl
Mir-425 GL841583.1: 1571636-1571698 [-] UCSC Ensembl
Mir-191 GL841583.1: 1573675-1573738 [-] UCSC Ensembl
Seed AUGACAC
Precursor
(pre-Mir +30nt flank)		 
CACAGGACUCUGGAACAGAAAGUGCUUUGGAAUGACACGAUCACUCCCGUUGAGCGGACAGCCAAGAAGCCAUCGGGCAUAUCGUGUCUGUCCAAUGCUCUUUCGGAGCCUCCUGCAGGGAUC
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Structure
        10          20        30        40        50        60  
CACAGGACUCUGGAACA--|    U  U     AU        CACU    U  A CGGACAG 
                   GAAAG GC UUGGA  GACACGAU    CCCG UG G       \
                   CUUUC CG AACCU  CUGUGCUA    GGGC AC C       C
CUAGGGACGUCCUCCGAGG^    U  U     GU        UAC-    U  - GAAGAAC 
 120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-425_5p
mirBase accessionNone
Sequence 
0- AAUGACACGAUCACUCCCGUUGAG -24
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Star sequence

Sha-Mir-425_3p*
mirBase accessionNone
Sequence 
40- CAUCGGGCAUAUCGUGUCUGUCC -63
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