MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-2970

Family name MIR-2970 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-2970  Ami-Mir-2970  Cli-Mir-2970  Cpi-Mir-2970  Gga-Mir-2970  Gja-Mir-2970  Lch-Mir-2970  Mdo-Mir-2970  Mun-Mir-2970  Neu-Mir-2970  Oan-Mir-2970  Pbv-Mir-2970  Spt-Mir-2970  Tgu-Mir-2970  Xla-Mir-2970-P1  Xla-Mir-2970-P2  Xtr-Mir-2970 
Node of Origin (locus) Sarcopterygii
Node of Origin (family) Sarcopterygii
Genome context
(DEVIL_add)		 GL841583.1: 1571177-1571235 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2970)		 Mir-2970 GL841583.1: 1571177-1571235 [-] UCSC Ensembl
Mir-425 GL841583.1: 1571636-1571698 [-] UCSC Ensembl
Mir-191 GL841583.1: 1573675-1573738 [-] UCSC Ensembl
Seed ACAGUCA
Precursor
(pre-Mir +30nt flank)		 
UGAGCUAGCAGGUCUCUUCCUGUCACUACAGACAGUCAGUAGUUGGUCUAGCGUGACGAGGAAUUCUCAGAUCACCUCUUGGCUGUGAGUGGUGGAGAGAGCACUGGCCCGGUACAAUG
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Structure
        10           20        30        40         50        
UGAGCUAGCAGGUCUCU--  -| G       AG        U  U      -  CGUGAC 
                   UC CU UCACUAC  ACAGUCAG AG UGGUCU AG      G
                   AG GA GGUGGUG  UGUCGGUU UC ACUAGA UC      A
GUAACAUGGCCCGGUCACG  A^ -       AG        C  C      C  UUAAGG 
       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-2970_5p
mirBase accessionNone
Sequence 
0- GACAGUCAGUAGUUGGUCUAGC -22
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Star sequence

Sha-Mir-2970_3p* (predicted)
mirBase accessionNone
Sequence 
37- CAGAUCACCUCUUGGCUGUGAG -59
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