MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-425

Family name MIR-425 (all species)
Species Chicken (Gallus gallus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-425  Ami-Mir-425  Bta-Mir-425  Cfa-Mir-425  Cja-Mir-425  Cli-Mir-425  Cmi-Mir-425  Cpi-Mir-425  Cpo-Mir-425  Dno-Mir-425  Dre-Mir-425  Eca-Mir-425  Ete-Mir-425  Gja-Mir-425  Gmo-Mir-425  Hsa-Mir-425  Laf-Mir-425  Loc-Mir-425  Mal-Mir-425  Mdo-Mir-425  Mml-Mir-425  Mmr-Mir-425  Mmu-Mir-425  Mun-Mir-425  Neu-Mir-425  Oan-Mir-425  Ocu-Mir-425  Pab-Mir-425  Pbv-Mir-425  Rno-Mir-425  Sha-Mir-425  Spt-Mir-425  Sto-Mir-425  Tgu-Mir-425  Tni-Mir-425  Xla-Mir-425-P1  Xla-Mir-425-P2  Xtr-Mir-425 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Gallus_gallus.GRCg6a)		 12: 12045651-12045713 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-425)		 Mir-191-v1 12: 12045267-12045326 [+] UCSC Ensembl
Mir-191-v2 12: 12045268-12045325 [+] UCSC Ensembl
Mir-425 12: 12045651-12045713 [+] UCSC Ensembl
Mir-2970 12: 12045916-12045973 [+] UCSC Ensembl
Seed AUGACAC
Precursor
(pre-Mir +30nt flank)		 
GAUCCGGCCCUUGGAGAGAGACGGCUUUGGAAUGACACGAUCACUCCCGCUGAGCGCGCAGCCACAGAGCCAUCGGGGAUGUCGUGUCUGUCCUAAGCUCUUUCGGCGCCUCUGAGCCCCCCC
Get precursor sequence
Structure
        10          20        30        40        50        60 
GAUCCGGCCCUUGGAGA--|   C     U   AU       U  CU    C  AGCGCGCA 
                   GAGA GGCUU GGA  GACACGA CA  CCCG UG        G
                   CUUU UCGAA CCU  CUGUGCU GU  GGGC AC        C
CCCCCCCGAGUCUCCGCGG^   C     U   GU       -  AG    U  CGAGACAC 
 120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-425_5p
mirBase accessionNone
Sequence 
0- AAUGACACGAUCACUCCCGCUGA -23
Get sequence
Star sequence

Gga-Mir-425_3p*
mirBase accessionNone
Sequence 
40- CAUCGGGGAUGUCGUGUCUGUCC -63
Get sequence