MirGeneDB 3.0
MirGeneDB ID

Spt-Mir-203

Family name MIR-203 (all species)
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-203-v1  Ami-Mir-203-v1  Bta-Mir-203-v1  Cfa-Mir-203-v1  Cja-Mir-203-v1  Cmi-Mir-203-P5-v1  Cmi-Mir-203-P6-v1  Cpi-Mir-203-v1  Cpo-Mir-203-v1  Dno-Mir-203-v1  Dre-Mir-203-P1-v1  Dre-Mir-203-P2-v1  Ebu-Mir-203-P3  Ebu-Mir-203-P4  Eca-Mir-203-v1  Ete-Mir-203-v1  Gga-Mir-203-v1  Gja-Mir-203-v1  Gmo-Mir-203-P1-v1  Gmo-Mir-203-P2-v1  Hsa-Mir-203-v1  Lch-Mir-203  Loc-Mir-203-v1  Mal-Mir-203-P1-v1  Mal-Mir-203-P2-v1  Mdo-Mir-203-v1  Mml-Mir-203-v1  Mmr-Mir-203-v1  Mmu-Mir-203-v1  Mun-Mir-203-v1  Neu-Mir-203-v1  Oan-Mir-203-v1  Ocu-Mir-203-v1  Pab-Mir-203-v1  Pbv-Mir-203-v1  Pma-Mir-203-o1  Pma-Mir-203-o2-v1  Pma-Mir-203-o3-v1  Rno-Mir-203-v1  Sha-Mir-203-v1  Sto-Mir-203-v1  Tgu-Mir-203-v1  Tni-Mir-203-P2-v1  Xla-Mir-203-P7-v1  Xla-Mir-203-P8-v1  Xtr-Mir-203-v1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)		 QEPC01012495.1: 1987119-1987178 [+] UCSC Ensembl
Seed UGAAAUG
Precursor
(pre-Mir +30nt flank)		 
GCGCCGGGCACGACGCGGUCUCCCUGGUGCAGUGGUUCUUAACAGUUCAACAGUUCUCUAGCAUAAUUGUGAAAUGUUUAGGACCACUUGAUCCGGGAGGCGUGGGCAGCGGGGACUGCA
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Structure
        10          20        30        40        50          
GCGCCGGGCACGACGCG--|      U   GC         U    G    A   UUCUCU 
                   GUCUCCC GGU  AGUGGUUCU AACA UUCA CAG      \
                   CGGAGGG CUA  UCACCAGGA UUGU AAGU GUU      A
ACGUCAGGGGCGACGGGUG^      C   GU         U    A    -   AAUACG 
.       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Spt-Mir-203_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUGGUUCUUAACAGUUCAACAG -23
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Mature sequence

Spt-Mir-203_3p (predicted)
mirBase accessionNone
Sequence 
38- GUGAAAUGUUUAGGACCACUUG -60
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