MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-203-P4

Family name MIR-203 (all species)
Seed GAAAUGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-203-P3 
Orthologues Lch-Mir-203  Spt-Mir-203 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02009646.1: 1697054-1697113 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUUCCACGAUUCGGUGACGACCAGACGCAGUGGUCCCGAGCAGUUCAACAGUUCUCAUGCGCAAUUGUGAAAUGUUUCGGACCACUGCAUCUGGAAAUCAAAUGGCAACAUGAAUCAA
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Structure
        10        20          30        40        50          
CCUUUCCACGAUUCGGUGACGA--|    C          C     G    A  GUUCUCA 
                        CCAGA GCAGUGGUCC GAGCA UUCA CA       \
                        GGUCU CGUCACCAGG UUUGU AAGU GU       U
AACUAAGUACAACGGUAAACUAAA^    A          C     A    -  UAACGCG 
.       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
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Star sequence

Ebu-Mir-203-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- AGUGGUCCCGAGCAGUUCAACA -22
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Mature sequence

Ebu-Mir-203-P4_3p (predicted)

mirBase accessionNone
Sequence
39- UGAAAUGUUUCGGACCACUGC -60
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