MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-203-P3

Family name MIR-203 (all species)
Seed GAAAUGU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-203-P4 
Orthologues Lch-Mir-203  Pma-Mir-203-o3-v1  Pma-Mir-203-o3-v2  Spt-Mir-203 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02006070.1: 702849-702910 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGAAUGUUCGUGUCAGGUUUUUCCAUCCAGUGGUUCUAAUCAGUUCACAAUGUUCUGAUAUGACGAUGUGAAAUGUUUAGGACCACUAUGAUGGUUGAACUACGUACACCAAUCGGAGCA
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Structure
        10          20        30         40        50          
UGGGAAUGUUCGUGUCA--     UU     C-|          U  G      AUGUUCUG 
                   GGUUU  CCAUC  AGUGGUUCUAA CA UUCACA        \
                   UCAAG  GGUAG  UCACCAGGAUU GU AAGUGU        A
ACGAGGCUAACCACAUGCA     UU     UA^          U  A      AGCAGUAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Ebu-Mir-203-P3_5p* (predicted)

mirBase accessionNone
Sequence
0- AGUGGUUCUAAUCAGUUCACA -21
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Mature sequence

Ebu-Mir-203-P3_3p

mirBase accessionNone
Sequence
40- UGAAAUGUUUAGGACCACUAUG -62
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