| MirGeneDB ID | Lch-Mir-203 |
|---|---|
| Family name | MIR-203 (all species) |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-203-v1 Ami-Mir-203-v1 Bta-Mir-203-v1 Cfa-Mir-203-v1 Cja-Mir-203-v1 Cmi-Mir-203-P5-v1 Cmi-Mir-203-P6-v1 Cpi-Mir-203-v1 Cpo-Mir-203-v1 Dno-Mir-203-v1 Dre-Mir-203-P1-v1 Dre-Mir-203-P2-v1 Ebu-Mir-203-P3 Ebu-Mir-203-P4 Eca-Mir-203-v1 Ete-Mir-203-v1 Gga-Mir-203-v1 Gja-Mir-203-v1 Gmo-Mir-203-P1-v1 Gmo-Mir-203-P2-v1 Hsa-Mir-203-v1 Loc-Mir-203-v1 Mal-Mir-203-P1-v1 Mal-Mir-203-P2-v1 Mdo-Mir-203-v1 Mml-Mir-203-v1 Mmr-Mir-203-v1 Mmu-Mir-203-v1 Mun-Mir-203-v1 Neu-Mir-203-v1 Oan-Mir-203-v1 Ocu-Mir-203-v1 Pab-Mir-203-v1 Pbv-Mir-203-v1 Pma-Mir-203-o1 Pma-Mir-203-o2-v1 Pma-Mir-203-o3-v1 Rno-Mir-203-v1 Sha-Mir-203-v1 Spt-Mir-203 Sto-Mir-203-v1 Tgu-Mir-203-v1 Tni-Mir-203-P2-v1 Xla-Mir-203-P7-v1 Xla-Mir-203-P8-v1 Xtr-Mir-203-v1 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH126579.1: 1348806-1348865 [-] Ensembl |
| Seed | UGAAAUG |
| Precursor (pre-Mir +30nt flank) |
AAACUGGACUCUGUAUUGUCUUUUUGGUGCAGUGGUUCUAAAUAGUUCAACAGUUCUCUACCAAAAUUGUGAAAUGUUUAGGACCACUUGAUCAAGAAGGCCUUGACAUCAAACAAGAACGet precursor sequence |
| Structure | 10 20 30 40 50 AAACUGGACUCUGUAUU--| GC G A UUCUCU GUCUUUUUGGU AGUGGUUCUAAAUA UUCA CAG \ CGGAAGAACUA UCACCAGGAUUUGU AAGU GUU A CAAGAACAAACUACAGUUC^ GU A - AAAACC . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Lch-Mir-203_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGUGGUUCUAAAUAGUUCAACAG -23
Get sequence
|
| Mature sequence | Lch-Mir-203_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- GUGAAAUGUUUAGGACCACUUG -60
Get sequence
|
