MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-17-P2a

Family name MIR-17 (all species)
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-18
Paralogues Mmr-Mir-17-P1a  Mmr-Mir-17-P1c  Mmr-Mir-17-P1d  Mmr-Mir-17-P2c  Mmr-Mir-17-P4a  Mmr-Mir-17-P4c  Mmr-Mir-17-P4d 
Orthologues Aca-Mir-17-P2a  Ami-Mir-17-P2a  Bta-Mir-17-P2a  Cfa-Mir-17-P2a  Cja-Mir-17-P2a  Cli-Mir-17-P2a  Cmi-Mir-17-P2a  Cpi-Mir-17-P2a  Cpo-Mir-17-P2a  Dno-Mir-17-P2a  Dre-Mir-17-P2a1  Dre-Mir-17-P2a2  Eca-Mir-17-P2a  Ete-Mir-17-P2a  Gga-Mir-17-P2a  Gja-Mir-17-P2a  Gmo-Mir-17-P2a1  Gmo-Mir-17-P2a2  Hsa-Mir-17-P2a  Laf-Mir-17-P2a  Lch-Mir-17-P2a  Loc-Mir-17-P2a  Mal-Mir-17-P2a2a  Mal-Mir-17-P2a2b  Mdo-Mir-17-P2a  Mml-Mir-17-P2a  Mmu-Mir-17-P2a  Mun-Mir-17-P2a  Neu-Mir-17-P2a  Oan-Mir-17-P2a  Ocu-Mir-17-P2a  Pab-Mir-17-P2a  Pbv-Mir-17-P2a  Rno-Mir-17-P2a  Sha-Mir-17-P2a  Spt-Mir-17-P2a  Sto-Mir-17-P2a  Tgu-Mir-17-P2a  Tni-Mir-17-P2a1  Tni-Mir-17-P2a2  Xla-Mir-17-P2a3  Xla-Mir-17-P2a4  Xtr-Mir-17-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007673.1: 22000134-22000198 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-17-P2a)		 Mir-92-P1a CM007673.1: 21999576-21999634 [-] UCSC Ensembl
Mir-19-P2a CM007673.1: 21999691-21999751 [-] UCSC Ensembl
Mir-17-P4a CM007673.1: 21999828-21999886 [-] UCSC Ensembl
Mir-19-P1a CM007673.1: 21999993-22000050 [-] UCSC Ensembl
Mir-17-P2a CM007673.1: 22000134-22000198 [-] UCSC Ensembl
Mir-17-P1a CM007673.1: 22000277-22000336 [-] UCSC Ensembl
Seed AAGGUGC
Precursor
(pre-Mir +30nt flank)		 
GGGCCUGCUGAUGUUGAGUGCUUUUUGUUCUAAGGUGCAUCUAGUGCAGAUAGUGAAGUAGAUUAGCAUCUACUGCCCUAAGUGCUCCUUCUGGCAUAAGAAGUUAUGUUUUCAUCCAAUAAUUC
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Structure
        10          20        30          40        50        60 
GGGCCUGCUGAUGUUGAGU--         U   --|  U   UC   U    A   UGAAGUA 
                     GCUUUUUGU CUA  AGG GCA  UAG GCAG UAG       G
                     UGAAGAAUA GGU  UCC CGU  AUC CGUC AUC       A
CUUAAUAACCUACUUUUGUAU         C   CU^  U   GA   C    -   UACGAUU 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-17-P2a_5p
mirBase accessionMIMAT0049197
Sequence 
0- UAAGGUGCAUCUAGUGCAGAUAG -23
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Star sequence

Mmr-Mir-17-P2a_3p*
mirBase accessionNone
Sequence 
41- ACUGCCCUAAGUGCUCCUUCUGGC -65
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