MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-29-P2d2

Family name MIR-29 (all species)
Seed AGCACCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-29-P1b1-v1  Mal-Mir-29-P1b1-v2  Mal-Mir-29-P1b2-v1  Mal-Mir-29-P1b2-v2  Mal-Mir-29-P1d1  Mal-Mir-29-P1d2-v1  Mal-Mir-29-P1d2-v2  Mal-Mir-29-P2b1-v1  Mal-Mir-29-P2b1-v2  Mal-Mir-29-P2d1 
Orthologues Aca-Mir-29-P2d  Ami-Mir-29-P2d  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bla-Mir-29-P2  Bta-Mir-29-P2d2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Cli-Mir-29-P2d  Cmi-Mir-29-P2d  Cpi-Mir-29-P2d  Cpo-Mir-29-P2d  Csc-Mir-29-P2  Cte-Mir-29-P2  Dno-Mir-29-P2d  Dre-Mir-29-P2d2  Esc-Mir-29-P2  Ete-Mir-29-P2d  Gga-Mir-29-P2d  Gja-Mir-29-P2d  Gmo-Mir-29-P2d2  Hsa-Mir-29-P2d  Isc-Mir-29-P2  Lch-Mir-29-P2d  Lgi-Mir-29-P2  Loc-Mir-29-P2d-v1  Loc-Mir-29-P2d-v2  Mdo-Mir-29-P2d  Mml-Mir-29-P2d  Mmu-Mir-29-P2d  Mun-Mir-29-P2d  Npo-Mir-29-P2  Oan-Mir-29-P2d  Obi-Mir-29-P2  Ocu-Mir-29-P2d  Ovu-Mir-29-P2  Pbv-Mir-29-P2d  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sha-Mir-29-P2d  Sko-Mir-29-P2  Spt-Mir-29-P2d  Spu-Mir-29-P2  Sto-Mir-29-P2d  Tgu-Mir-29-P2d  Tni-Mir-29-P2d2  Xbo-Mir-29-P2  Xtr-Mir-29-P2d 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884882.1: 158998-159057 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAAGCUUUUUGUCCUCUCUCCAAGGUUGACCGAUUUCUUUUGGUGUUCAGAGUCUGCUUUUGUUUCUAGCACCAUUUGAAAUCGGUUACAGUGAAGGACAGAUCUCAUCUUACGCUGA
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Structure
        10           20        30        40        50          
CUCAAGCUUUUUGUCCUC---|  C  AG  U          UUU       C   GUCUGC 
                     UCU CA  GU GACCGAUUUC   UGGUGUU AGA      \
                     GGA GU  CA UUGGCUAAAG   ACCACGA UCU      U
AGUCGCAUUCUACUCUAGACA^  A  GA  -          UUU       -   UUGUUU 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-29-P2d2_5p*
mirBase accessionNone
Sequence 
0- ACCGAUUUCUUUUGGUGUUCAGA -23
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Mature sequence

Mal-Mir-29-P2d2_3p
mirBase accessionNone
Sequence 
38- UAGCACCAUUUGAAAUCGGUUA -60
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