MirGeneDB 3.0
MirGeneDB ID

Hme-Iab-4

Family name IAB-4 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues Hme-Iab-4-as 
Orthologues Aae-Iab-4-P1  Aae-Iab-4-P1-as  Aae-Iab-4-P2  Aae-Iab-4-P2-as  Aga-Iab-4  Aga-Iab-4-as  Bge-Iab-4  Bge-Iab-4-as  Csc-Iab-4-P6  Csc-Iab-4-P6-as  Csc-Iab-4-P7  Csc-Iab-4-P7-as  Dan-Iab-4  Dan-Iab-4-as  Dlo-Iab-4  Dlo-Iab-4-as  Dma-Iab-4  Dme-Iab-4  Dme-Iab-4-as  Dmo-Iab-4  Dmo-Iab-4-as  Dpu-Iab-4  Dpu-Iab-4-as  Dsi-Iab-4  Dsi-Iab-4-as  Dya-Iab-4  Dya-Iab-4-as  Gpa-Iab-4  Isc-Iab-4  Lpo-Iab-4-P3  Lpo-Iab-4-P3-as  Lpo-Iab-4-P4  Lpo-Iab-4-P5  Lpo-Iab-4-P5-as  Tca-Iab-4  Tca-Iab-4-as 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Hmel_1)		 HE667775: 54413-54472 [-] Ensembl
Clustered miRNAs
(< 50kb from Iab-4)		 Iab-4 HE667775: 54413-54472 [-] Ensembl
Iab-4-as HE667775: 54413-54475 [+] Ensembl
Seed CGUAUAC
Precursor
(pre-Mir +30nt flank)		 
GGCAAAUGAAGAUUACGCGUCGCCUUCUGUACGUAUACUGAAUGUAUCCUGAGUGUCUCAUUCUUUCCGGUAUACCUUCAGUAUACGUAACAGAAGAUGACACUGAUCACCGUGCGAAGA
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Structure
        10         20         30        40         50         
GGCAAAUGAAGAUUACGC-    C      -             U    -| U  GUGUCU 
                   GUCG CUUCUG UACGUAUACUGAA GUAU CC GA      \
                   CAGU GAAGAC AUGCAUAUGACUU CAUA GG CU      C
AGAAGCGUGCCACUAGUCA    A      A             C    U^ C  UUCUUA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Mature sequence

Hme-Iab-4_5p
mirBase accessionNone
Sequence 
0- ACGUAUACUGAAUGUAUCCUGA -22
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Star sequence

Hme-Iab-4_3p*
mirBase accessionNone
Sequence 
38- GGUAUACCUUCAGUAUACGUAA -60
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