MirGeneDB 2.1
MirGeneDB ID

Dpu-Iab-4

Family name IAB-4 (all species)
Seed CGUAUAC
Species Common water flea (Daphnia pulex)
MiRBase ID dpu-mir-iab-4
Paralogues Dpu-Iab-4-as 
Orthologues Aae-Iab-4-P1  Aae-Iab-4-P1-as  Aae-Iab-4-P2  Aae-Iab-4-P2-as  Bge-Iab-4  Bge-Iab-4-as  Csc-Iab-4-P6  Csc-Iab-4-P7  Dan-Iab-4  Dan-Iab-4-as  Dma-Iab-4  Dme-Iab-4  Dme-Iab-4-as  Dmo-Iab-4  Dmo-Iab-4-as  Dsi-Iab-4  Dsi-Iab-4-as  Dya-Iab-4  Dya-Iab-4-as  Hme-Iab-4  Hme-Iab-4-as  Isc-Iab-4  Lpo-Iab-4-P3  Lpo-Iab-4-P3-as  Lpo-Iab-4-P4  Lpo-Iab-4-P5  Lpo-Iab-4-P5-as  Tca-Iab-4  Tca-Iab-4-as 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_7: 515547-515604 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACUCGGUCGACUGGAUGUUUAACCCCCUGGACGUAUACUGAAUGUAUCCUGAGCUUCAUUCAUUCCGGUAUACCUUCAGUAUACGUAACAGGAGGCAACACUUUCAACAAAUUACAAU
Get precursor sequence
Structure
        10        20         30         40         50        
ACUCGGUCGACUGGAUGUUUAA-  C    G-            U    -| U  GCUUC 
                       CC CCUG  ACGUAUACUGAA GUAU CC GA     \
                       GG GGAC  UGCAUAUGACUU CAUA GG CU     A
UAACAUUAAACAACUUUCACAAC  A    AA            C    U^ C  UACUU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dpu-Iab-4_5p
mirBase accessionMIMAT0012677
Sequence 
0- ACGUAUACUGAAUGUAUCCUGA -22
Get sequence
Star sequence

Dpu-Iab-4_3p* (predicted)
mirBase accessionMIMAT0012678
Sequence 
36- GGUAUACCUUCAGUAUACGUAA -58
Get sequence